Gene Tmz1t_3192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3192 
Symbol 
ID7874332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp3473471 
End bp3474109 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content70% 
IMG OID643700121 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002890164 
Protein GI237653850 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.513085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGCAG TGCCCGCAGC GCCTGACCAG ATCGTACATG TCGTCGACGA CGACGAAGCC 
CTGCGCGACT CGCTCGCCTG GATGCTGGAG GCCAACGGCC ACGCGGTCGC GGTGCACGAG 
TCGGGCGAGG CCTTCCTCGC CGCCTGCACG CCGGAGATGA CCGGCTGCGT GCTGCTCGAC 
GTGCGCATGC CGGGCATGAG CGGGCTGGAG GTGTTCGAGG AGCTCGGGCG GCGGCGCTGC 
GGGCTGCCGG TGGTGTTCAT CACCGGCCAC GGCGACGTGC CGATGGCGGT GTCCGCGCTC 
AAGCAGGGCG CGGTGGATTT CGTCGAGAAA CCCTTCGGCG AGCGCGAGAT GCTGCGCGTG 
GTCGAGCAGT GCCTGCGCCT CGAGCGCGAG ACCCGCGACC GCCGCCTGCA GGAGGCCGAC 
ACCGCGCGCC GGCTCGGGCT GCTCACCCAG CGCGAGCGCG AGGTGCTCGA GCTGATCATC 
GTCGGCAAGC TGAACAAGCA GATCGCCGAC GTGCTCGGCA TCAGCATCAA GACCGTCGAG 
GTGCATCGCG CGCGCGTGAT GGAGAAGATG GGCGCGCATT CGCTCGCCGA ACTCGTCCAG 
CACGTGGTGG TACTCGAACC CGGCGCCGTT CCGCGCTGA
 
Protein sequence
MSAVPAAPDQ IVHVVDDDEA LRDSLAWMLE ANGHAVAVHE SGEAFLAACT PEMTGCVLLD 
VRMPGMSGLE VFEELGRRRC GLPVVFITGH GDVPMAVSAL KQGAVDFVEK PFGEREMLRV 
VEQCLRLERE TRDRRLQEAD TARRLGLLTQ REREVLELII VGKLNKQIAD VLGISIKTVE 
VHRARVMEKM GAHSLAELVQ HVVVLEPGAV PR