| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2226 |
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| Symbol | |
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| ID | 4664287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 2581692 |
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| End bp | 2583401 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639820471 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_967669 |
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| Protein GI | 120603269 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.977744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCATA TTCTTCTTGT CGAGGATGAC GAGAACCTTC GTTTCACGTT CGAGGCCTTC
CTGCGTCGGG CGGGCTATAC CGTGGACCCG GTGCCTTCTG TGCCTGCGGC CCTTGAAGCG
GCCTTGCGCC AGCCGCCCGA TGTCGTCGTG GCGGACATCC TGCTCGGTGG GGAGGAGGGC
CTTGTGCTGC CCGGTTCGCT ACGCAGCCGC GGCCTTGAAG CCCCCGTCCT GCTGGTGACG
GGCAATCCGA GCCTTGATAC GGCAAGCCGG GCGGTATCGA CCGGTGCCTT CGAGTATCTC
ATCAAGCCCG TGGAACGGGA TGCACTGCTC GCTGCCGTGG CACGGGCGCA CGCCCACAAG
TCGCTACAGG ATGAACGGGC CGCACTCCAC GACGAATTGC AGCGGCTGCG GGCGCATCTC
GAGGCCATTT TCCGTAGCGT GCCCGACGTG CTGGTCTCGG TGGGGCGTGA CGGTCGTGTC
GTGCGCATCA ACGACGCCGG GCTTGGTGTG CTGCGCCTTT CCGGCGAGGA GGTCGAGGGC
AGGCACTGGC AGGAGGTGTT CGGCGAATGG GAGTCGCAGC TTGGTGACGT CCTGCGCCAT
GCCCTCGAAT CGCGTCAGCG TGTTCCGCGT CGCAGGGTGA ACATCACCGT CGACGAGGGG
GCTTCACAGG TTTTCGAAGT GAGTGCCTCG CCCCTGCGCG GAGAGACGGG CGACTACCTC
GGTGCGGTGC TCGTTCTTCG TGACATCTCA CGGCTGGCGG CGTGCTGCCC CCCCGGTGGT
GCGCCGGGTG AATGGGGCCT TGTCGGGCTC TCTCCCGCCA TGCAGCGTAT CTACCATCTC
CTTGAAGACC TCGCGCCGAC CGATACCACG GTACTCGTGA CCGGGGAAAG CGGAACGGGC
AAGGAACTGG TGGCGGAGGC CCTTCATAAC GCGGGGCCGC GTGCCACGGG CCCTCTCATC
AAGGTCAATT GCGCGGCCCT GCCTGAGACG CTCCTGGAAA GCGAATTGTT CGGTCATGTG
CGCGGGGCGT TCACCGGTGC CTTGCGTGAC CGGGTGGGAC GCTTCCAGCT GGCGCACGGC
GGCACCATAT TCCTCGACGA GATAGGCGAC CTGTCGCCGC AGGTGCAGTT GCGGCTGCTA
CGCGTCCTTC AGGAACGCGA GTTCGAACGG GTGGGCGACA CCCGCACCAC GCGTGTGGAT
GTGCGGGTCA TCGCCGCGAC CCATCGCAAT CTGCGCGAAC GCGTAGCAAG CGGGCTGTTC
CGCGAAGACC TCTACTACCG GCTGCGGGTT GTCGAACTGC ATATGCCCCC TTTGCGTGAG
CGGCATGAAG ACCTTGCGCT GCTCGCCGAA CACTTCGTCG GGGTGTTCAA CCAGCAGTTC
TCACGCTGTG TCATGGGGTT CACAGAAGCG GCAAGCCGCG CTCTCATGAC CCACAGCTGG
CCCGGCAACG TGCGGGAATT GCGCCATGCC GTCGAGCACG GCTTCATCCT GTGCAAGGGC
GAGCGCATCG ACCTTGCCGA CCTGCCTCCT GACGTGCAGG GGACGGAAGC TAGCGTGTTC
CCCCGGGCCG AGCGTTCAGG GGTGCATGAA GCGGCCGTGC GGGAGGCCCT GAAGAAGGCC
GGGGGCAACA AGGCACGGGC TGCAAGGTTG CTCGGGGTGG CCCGACAGAC GCTGTACCGC
AAGCTGGCCG AGTATGGCAT TCGCGACTGA
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| Protein sequence | MAHILLVEDD ENLRFTFEAF LRRAGYTVDP VPSVPAALEA ALRQPPDVVV ADILLGGEEG
LVLPGSLRSR GLEAPVLLVT GNPSLDTASR AVSTGAFEYL IKPVERDALL AAVARAHAHK
SLQDERAALH DELQRLRAHL EAIFRSVPDV LVSVGRDGRV VRINDAGLGV LRLSGEEVEG
RHWQEVFGEW ESQLGDVLRH ALESRQRVPR RRVNITVDEG ASQVFEVSAS PLRGETGDYL
GAVLVLRDIS RLAACCPPGG APGEWGLVGL SPAMQRIYHL LEDLAPTDTT VLVTGESGTG
KELVAEALHN AGPRATGPLI KVNCAALPET LLESELFGHV RGAFTGALRD RVGRFQLAHG
GTIFLDEIGD LSPQVQLRLL RVLQEREFER VGDTRTTRVD VRVIAATHRN LRERVASGLF
REDLYYRLRV VELHMPPLRE RHEDLALLAE HFVGVFNQQF SRCVMGFTEA ASRALMTHSW
PGNVRELRHA VEHGFILCKG ERIDLADLPP DVQGTEASVF PRAERSGVHE AAVREALKKA
GGNKARAARL LGVARQTLYR KLAEYGIRD
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