| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1359 |
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| Symbol | |
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| ID | 4251378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1580499 |
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| End bp | 1581878 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117943 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_733494 |
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| Protein GI | 113969701 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0913399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTGC CCAATTCAAT TCAAGACTAT AGCGTACTGA TCATCGACGA TGAGCCCCAT
ATAGGCACAG TGCTCGTGCA GCTGTTTGAG TTGGAAGGCA TTAAAGCCTT CGCCACTACC
GATCCCAAAG GGATCGCCAA ATTACTCGAC AGAGACTGGG CCGGAGTAGT GATTTCCGAT
GTGAATATGC CGCAGCTCGA CGGCATCAGT TTGATGCAGC AAATTCGTCA GCAGGACCCC
GATTTACCCG TGGTGCTGCT CACCGGCTTT GGCGATATCG CCATGGCGGT CAATGCGTTA
AAACAAGGGG CCTACGATTT TCTCGAAAAA CCCTTTAATA ACGAACACAT GCTAGACGTG
GTGAAGCGCG CCTTAGATAA ACGCAGCCTC ACCCTAGAGA ACCGTAAATT AAAGAAAGAG
TTAGAAAGCC ATAACGTACC AGGCCCAAGG ATATTAGGCC ACAGCGTCGG CATTTTGCGC
ATGCGTCACA TCATAGACCA AGTGATCGAC ACCCCCGCCG ATGTGCTTAT TGAAGGTGAA
ACCGGTACGG GCAAGGAATT GGTCGCCCGC TATCTGCACG ACCACAGCAG TCGCAATCAA
GCCAACTTTG TGGCAATTAA CTGCGGCGCG ATTCCCGAAA ACTTGATTGA GAGCGAGCTA
TTTGGCGCCG AAGCTGGCGC CTTTACCGGT GTCGATAAAC TGCGTGTCGG CAAGTTTGAA
TACGCCAATG GCGGCACACT CTTTTTAGAT GAAATCGAAA GCACGCCGCT GTCGTTACAG
GTCAAACTGC TGCGGGTGCT CGAAGATCGT AAGGTCGAAC GCCTAGGCTC CAATAAAAGC
ATTCATCTGG ATATTCGGGT AATTGCCGCC ACTAAGGTGG ATTTAAAGTC CCTGTGCGAC
ACCGGAGAGT TTCGCCAAGA CCTGCTCTAT CGCTTAAATC TGGTGACTGT GCCCATTCCA
CCACTCAGAG ATCGCCGCGA AGATATTCCC TTATTATTCT TACATTTTGC CCGTATGGCC
TCGGCGCGCT ATCACAAGGC CTTAATTGCC CTCAATGCCG AGCAGAATGC TATCCTCAGC
TCCCACGACT GGCCGGGTAA TGTGCGTGAG CTGCGAAATC TGGCCGAACG TTATGTGTTA
CTCGGTGGCG AAGCCGCCTT CGCAGGCACC TTAGGCAACG CGCCCAGTCT GCATACCAGT
ATGTCATTGC TGCAACGGGT CGAGTTTTTT GAGCGGGTAT TGATTGAAGA AGCCTTAAGC
CATAACAAGG GAAGCATTAA GCAGACAATG GAGCAACTCG AACTGCCCCG CAAAACCTTA
TACGACAAGA TGCGTAAATA CGATTTAGAC CGCAAGCAAT ATATCAACGC CGACGAATAA
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| Protein sequence | MSLPNSIQDY SVLIIDDEPH IGTVLVQLFE LEGIKAFATT DPKGIAKLLD RDWAGVVISD
VNMPQLDGIS LMQQIRQQDP DLPVVLLTGF GDIAMAVNAL KQGAYDFLEK PFNNEHMLDV
VKRALDKRSL TLENRKLKKE LESHNVPGPR ILGHSVGILR MRHIIDQVID TPADVLIEGE
TGTGKELVAR YLHDHSSRNQ ANFVAINCGA IPENLIESEL FGAEAGAFTG VDKLRVGKFE
YANGGTLFLD EIESTPLSLQ VKLLRVLEDR KVERLGSNKS IHLDIRVIAA TKVDLKSLCD
TGEFRQDLLY RLNLVTVPIP PLRDRREDIP LLFLHFARMA SARYHKALIA LNAEQNAILS
SHDWPGNVRE LRNLAERYVL LGGEAAFAGT LGNAPSLHTS MSLLQRVEFF ERVLIEEALS
HNKGSIKQTM EQLELPRKTL YDKMRKYDLD RKQYINADE
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