| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1039 |
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| Symbol | |
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| ID | 2688726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1125639 |
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| End bp | 1127339 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637125708 |
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| Product | sigma-54 dependent DNA-binding response regulator |
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| Protein accession | NP_952092 |
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| Protein GI | 39996141 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATACA GCATTCTCGT GGTAGACGAC GAGGAAAGCC TTCGCTACAC CTTCCGCTGC
TTCCTGGAGC ATCAGGGCTA TGAGGTAGCG ATTGCGGCGA ACTACGAAGA GGCCTTGGCG
GCTCTGCCCG CCGGGTTCGA TCTCGTTTTC GCCGATATCG TCCTCGGCGG CTGGACCGGC
GTCGATCTGC TGCGCGAGGC CCGTTTGCGC GGTTTCGACG TTCCCTTCGT CATGGTGACC
GGCTACCCCC ACATCGATAC CGCCTCTGAA GCGCTCAGGC TCGGCGCTTA CGACTACATT
CCCAAGCCGG TGAAGCAGGA GACCATCGTC CGGGTTGCCC GCATGGCGAT CCGTCACCAC
CTGGTCTCCA AGGAGAAAGA TCAGTACCGC TCCAACCTGG AGGCAATCTT CCGCAGCGTC
AAGGATGCCA TCGTCACTGT CGACCGGGGG ATGCGGCTCA TCGCCTGCAA CGCTGCCGCC
ACCACGCTCT GCGGCATCAC GAAGGACAGG GTCGAGGCTC AGGAGCTCTT CTGCCCCGAA
GATTGCCAGC ACCAGTGCCT GAAGCTTCTG GAGGAGACCC TCGTCAAGCG TCAGCCCATC
GAAGGGCAGC GGTTCGTCTG CCGCAGACAG GGACAGCCCG ATCGCATAAT CGCCGCAGCC
ACGTCGCCCT TGCTGGATCA ACTGGAAGGT TTCGACGGAG CCGTCCTCGT GGCCCGGGAC
GAAACCCGTC TCGACCACCT GGAGCGCCGG GCTTCGGGGC GCCGTTCCCA TCTGTCGCTG
GTCGGCGGCA GCGCGGCGAT GCAGCGGCTC TATTCGCTGC TGGAGGCGCT GTCGGAGGTG
GATACCACCG TCCTCATCAC CGGCGAGAGC GGAACCGGCA AGGAGCTGGC CGCAGATGCC
CTCCACCGGG GCGGACACCG TGCGGACAAG CCCTTTGTTG CGGTAAACTG CGCCGCTCTT
CCCGAAACCC TTTTGGAGAG CGAGTTGTTC GGCCATGTGA AGGGGGCGTT CACCGGCGCG
CTCAGGGACA AGGAGGGGCG CTTCCAGAAG GCCGATGGCG GAACGATTTT CCTGGACGAG
ATCGGGGATA TATCCCCCGC CATGCAGCTG AGACTGCTGC GGGTGCTTCA GGAGAAAGTG
TTCGAGCGGG TAGGCGATGC GACGCCCATC CGGGTCGACG TGCGGATCGT GGCGGCCACC
AACCGCGACC TGGCGCAACT GGTCCGCGAA GGGCGGTTCC GGGAAGATCT CTATTACCGT
CTTAAAGTCG TGCACCTGGA ACTTCCTGCA CTCCGGGAGC GCAAAGAGGA TATCCCTTTG
CTGGTGGAGC ACTTTCTCGG GCGACTGACC GCCCGCTTCG AGAGAAATCC GCTCACCATC
TCCCAGGAGG CGCTGGACAC GCTGATGTCC CACCCCTGGC CCGGCAACGT GCGCGAACTT
GAACACGTTC TGGAACATGC GGCGGTCATC TGCCGGGGGC ACGTCATTCT GTCCGATCAT
CTGCCTGCCG ACCTTGCTCC TGCCGTGCCG GCTTCCGCGG CGCCGCGGAC GGTCAGGGTA
ACGGACGAAG CAGCCCTGAT CCGCGATGCC CTCGTCCGGG CCGGCGGCAA CAAGACCAAG
GCGGCAAAGC TGCTCGGCAT GAGCCGCCGG ACTATTTATC GCAAGCTTGA TGAACACGGC
ATCTTCGGTG ACTTTAAGTA G
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| Protein sequence | MTYSILVVDD EESLRYTFRC FLEHQGYEVA IAANYEEALA ALPAGFDLVF ADIVLGGWTG
VDLLREARLR GFDVPFVMVT GYPHIDTASE ALRLGAYDYI PKPVKQETIV RVARMAIRHH
LVSKEKDQYR SNLEAIFRSV KDAIVTVDRG MRLIACNAAA TTLCGITKDR VEAQELFCPE
DCQHQCLKLL EETLVKRQPI EGQRFVCRRQ GQPDRIIAAA TSPLLDQLEG FDGAVLVARD
ETRLDHLERR ASGRRSHLSL VGGSAAMQRL YSLLEALSEV DTTVLITGES GTGKELAADA
LHRGGHRADK PFVAVNCAAL PETLLESELF GHVKGAFTGA LRDKEGRFQK ADGGTIFLDE
IGDISPAMQL RLLRVLQEKV FERVGDATPI RVDVRIVAAT NRDLAQLVRE GRFREDLYYR
LKVVHLELPA LRERKEDIPL LVEHFLGRLT ARFERNPLTI SQEALDTLMS HPWPGNVREL
EHVLEHAAVI CRGHVILSDH LPADLAPAVP ASAAPRTVRV TDEAALIRDA LVRAGGNKTK
AAKLLGMSRR TIYRKLDEHG IFGDFK
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