| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2506 |
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| Symbol | |
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| ID | 2687823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2762042 |
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| End bp | 2763736 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637127196 |
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| Product | sensory box protein/sigma-54 dependent DNA-binding response regulator |
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| Protein accession | NP_953552 |
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| Protein GI | 39997601 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.92979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGAA GGGTTCTGAT AGTAGAGGAT GAGGACACGC TGCGGTTCAC GTTCGAGCAC
TTCCTCGCGG CCGAGGGCTA TGCCGTCGAT ACGGCGGCCG ATTTCGCGGA GGCGATCGGC
AAGGTCGAAT CCGCCGACTA TGACCTTGTT TTCACCGACA TCATCCTGGG CAACGATAAC
GGCATCGATG TCCTGCGCGA AGTCAAGGAG CGCCAGCCCT CCATCCCCGT AGTGATGATC
ACCGGCTATC CCAACGTGGA GACGGCGTCC GACGCCGTCC GGCTCGGGGC CTTCGACTAT
CTCCCCAAGC CGGTCAAGCG CGACGCCCTG CTGCGGGTGG CTCGCATGGC CCTCGAACAC
AAGGACCTCA TGGAGGAGCG GGAGAAATAC CGGACCAACC TGGAGGCCAT CTTCCAGAGC
GTGGACGATG CCATCCTCAC CGTGGATCTG GACATGAACG TGGTGGCCTA CAACGAGTCC
GGGAAATACT TCTTCAGCCT CGCCGCCGAA TCCATCGGCA GGCGCTACGT GCCGGGAGAG
GGGAACGGCG CGTTCCTCCA CGCGCTCACG GAAACCCTCA AGACCAAGCG GCCGGTGGAG
ACCCAGCGGA CCGAATGCGT GGTCGGGGGG AGCGAAAAGC GCGTGGTGAG CCTCAAGACC
TCCCCCCTGG TGGACCGGAC CGGCACCTTC TCCGGGGCCG TCATGGTGGT GCGCGACGAA
ACGCGCCTGG ATGATCTGGA AAAGAGTTTC GAGGGGCGGG AGACGTTCCA CAACCTGGTG
GGAAGCAGCC CCCGCATGAA GGAGATTTAC GCCTTTGTCG AGTCCCTGGC CGATGTCCCC
ACTACCGTGC TGGTGACCGG CGAGAGCGGC ACCGGCAAGG AGCTCGTGGC GGCGGCCCTG
CACTACAAGG GGGGGCGGAG CACCAAGCCC TTCGTCAAGG TCAACTGTTC CGCCCTGGCG
GAACCGCTGC TGGAGAGCGA GCTGTTCGGC CACGTGAAAG GGGCCTTCAC CGGCGCCATC
AAGGACAAGA TGGGCCGTTT CCAGAAAGCG GACGGCGGCA CGATCTTCCT GGACGAGATC
GGCGACATCT CGCCGGGGAT GCAGGTGCGG CTGCTGCGGG TCCTGCAGGA GAGGGAATTC
GAGCGGGTGG GCGACTCCAC CCCCATCAAG GTGGATGTAC GGGTCATTGC CGCCACCAAC
GTCGACCTGG CGGAAAAGGT GCGGATCGGC CAGTTCCGGG AAGACCTCTT CTACCGCCTG
AAGGTCGTCC GGATCCACAT CCCGCCGCTG CGGGAACGGC GCGAGGATAT CCCCATGCTC
GTGGAACACT TCCTGGCCAA ATTCCGCGGC AAGTTCAAAA AGGACGTCAG CGCGGTTTCC
GACGAGGTCA TGAAGGTGTT CATGTCCTAT CCCTGGCCGG GCAATGTCCG CGAACTGGAA
CACGTGCTCG AACACTCGTG CATCGTCTGC ACTTCCGGCC TGATCACCCT GGAACACCTT
CCCTCGGATT TCATGGAACA CCATGAGATC CACGGCAACG AACCGGCCAC CGAGCGGGAG
ACCACCCTGC AGGCGATCCG GAAAGCCCTG GAAAAATCCG GCGGCAACAA GGCCAAGGCG
GCGCGCCTGC TCGGCATCAG CCGTATCACC TTGTACCGAA AACTCAATGA ATTAAAGATT
GTTCACGACG AGTAG
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| Protein sequence | MARRVLIVED EDTLRFTFEH FLAAEGYAVD TAADFAEAIG KVESADYDLV FTDIILGNDN
GIDVLREVKE RQPSIPVVMI TGYPNVETAS DAVRLGAFDY LPKPVKRDAL LRVARMALEH
KDLMEEREKY RTNLEAIFQS VDDAILTVDL DMNVVAYNES GKYFFSLAAE SIGRRYVPGE
GNGAFLHALT ETLKTKRPVE TQRTECVVGG SEKRVVSLKT SPLVDRTGTF SGAVMVVRDE
TRLDDLEKSF EGRETFHNLV GSSPRMKEIY AFVESLADVP TTVLVTGESG TGKELVAAAL
HYKGGRSTKP FVKVNCSALA EPLLESELFG HVKGAFTGAI KDKMGRFQKA DGGTIFLDEI
GDISPGMQVR LLRVLQEREF ERVGDSTPIK VDVRVIAATN VDLAEKVRIG QFREDLFYRL
KVVRIHIPPL RERREDIPML VEHFLAKFRG KFKKDVSAVS DEVMKVFMSY PWPGNVRELE
HVLEHSCIVC TSGLITLEHL PSDFMEHHEI HGNEPATERE TTLQAIRKAL EKSGGNKAKA
ARLLGISRIT LYRKLNELKI VHDE
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