More than 300 homologs were found in PanDaTox collection
for query gene Daci_5322 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  100 
 
 		 220 aa  437  9.999999999999999e-123  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_008752  Aave_1121  two component LuxR family transcriptional regulator  68.78 
 
 		 222 aa  263  2e-69  Acidovorax citrulli AAC00-1  Bacteria  normal  0.864132  normal  0.872256 
 
 
-
 
NC_008781  Pnap_3523  two component LuxR family transcriptional regulator  59.05 
 
 		 224 aa  244  9e-64  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  53.43 
 
 		 214 aa  211  7e-54  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  54.73 
 
 		 214 aa  210  1e-53  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  52.94 
 
 		 214 aa  210  1e-53  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  52.94 
 
 		 214 aa  210  1e-53  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  52.94 
 
 		 214 aa  210  1e-53  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  52.94 
 
 		 214 aa  210  2e-53  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  52.94 
 
 		 214 aa  209  2e-53  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  53.66 
 
 		 214 aa  207  1e-52  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  52.24 
 
 		 215 aa  206  3e-52  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  52.24 
 
 		 215 aa  205  4e-52  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  52.24 
 
 		 215 aa  205  4e-52  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  52.24 
 
 		 215 aa  205  4e-52  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  52.24 
 
 		 215 aa  205  4e-52  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  52.24 
 
 		 215 aa  205  4e-52  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  52.24 
 
 		 215 aa  205  4e-52  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  52.24 
 
 		 215 aa  204  8e-52  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  52.24 
 
 		 213 aa  201  9e-51  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  53.43 
 
 		 214 aa  199  1.9999999999999998e-50  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.10411 
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  52.24 
 
 		 213 aa  194  1e-48  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_010676  Bphyt_4476  two component transcriptional regulator, LuxR family  51 
 
 		 215 aa  189  4e-47  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A3419  LuxR response regulator receiver  50.97 
 
 		 231 aa  187  1e-46  Ralstonia eutropha JMP134  Bacteria  normal  0.393456  n/a   
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  48.53 
 
 		 217 aa  184  1.0000000000000001e-45  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011368  Rleg2_4527  two component transcriptional regulator, LuxR family  46.86 
 
 		 223 aa  184  1.0000000000000001e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.658241 
 
 
-
 
NC_007952  Bxe_B0788  two component LuxR family transcriptional regulator  51.5 
 
 		 218 aa  182  4.0000000000000006e-45  Burkholderia xenovorans LB400  Bacteria  normal  0.3296  normal  1 
 
 
-
 
NC_012854  Rleg_6399  two component transcriptional regulator, LuxR family  45.41 
 
 		 214 aa  179  2.9999999999999997e-44  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.139442 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  44.17 
 
 		 213 aa  175  4e-43  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_3992  two component transcriptional regulator, LuxR family  48.56 
 
 		 214 aa  175  4e-43  Variovorax paradoxus S110  Bacteria  normal  0.82671  n/a   
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  45.1 
 
 		 206 aa  174  7e-43  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_007973  Rmet_3576  two component LuxR family transcriptional regulator  49.51 
 
 		 228 aa  173  9.999999999999999e-43  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  47.14 
 
 		 214 aa  173  1.9999999999999998e-42  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  44.33 
 
 		 213 aa  172  5e-42  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  44.33 
 
 		 213 aa  172  5e-42  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  39.9 
 
 		 206 aa  171  7.999999999999999e-42  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_0905  putative nitrate/nitrite DNA-binding response regulator  45.32 
 
 		 206 aa  168  7e-41  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0826046  hitchhiker  0.00000533581 
 
 
-
 
NC_008255  CHU_1317  response regulator  38.97 
 
 		 220 aa  166  2e-40  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  40.47 
 
 		 233 aa  164  1.0000000000000001e-39  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  42.2 
 
 		 218 aa  160  2e-38  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009667  Oant_0443  two component LuxR family transcriptional regulator  43.35 
 
 		 213 aa  159  4e-38  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  41.23 
 
 		 215 aa  157  1e-37  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  37.62 
 
 		 215 aa  155  5.0000000000000005e-37  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_008752  Aave_4229  two component LuxR family transcriptional regulator  46.34 
 
 		 219 aa  154  8e-37  Acidovorax citrulli AAC00-1  Bacteria  normal  0.720334  normal  0.28913 
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  39.6 
 
 		 215 aa  154  9e-37  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  41.15 
 
 		 218 aa  154  1e-36  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  40.78 
 
 		 218 aa  152  2.9999999999999998e-36  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  40.19 
 
 		 218 aa  152  4e-36  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  40.19 
 
 		 218 aa  152  4e-36  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009952  Dshi_2345  two component transcriptional regulator  36.84 
 
 		 220 aa  151  5.9999999999999996e-36  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.499423  normal  0.134206 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  39.9 
 
 		 216 aa  150  1e-35  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  39.32 
 
 		 219 aa  150  2e-35  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  39.61 
 
 		 216 aa  150  2e-35  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  42.79 
 
 		 213 aa  149  3e-35  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  35.48 
 
 		 219 aa  148  5e-35  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  40.48 
 
 		 222 aa  148  6e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  35.75 
 
 		 212 aa  147  1.0000000000000001e-34  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  38.89 
 
 		 214 aa  147  1.0000000000000001e-34  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  38.22 
 
 		 208 aa  146  2.0000000000000003e-34  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  43.94 
 
 		 209 aa  146  3e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  40.49 
 
 		 221 aa  145  5e-34  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  40.95 
 
 		 235 aa  145  6e-34  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_010625  Bphy_7047  two component LuxR family transcriptional regulator  36.36 
 
 		 215 aa  143  2e-33  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.976007 
 
 
-
 
NC_009439  Pmen_0083  two component LuxR family transcriptional regulator  40.98 
 
 		 210 aa  143  2e-33  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_41040  Two-component response regulator, LuxR family  46.31 
 
 		 208 aa  144  2e-33  Azotobacter vinelandii DJ  Bacteria  normal  0.136918  n/a   
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  35.58 
 
 		 216 aa  143  2e-33  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_1873  response regulator receiver protein  38.42 
 
 		 215 aa  142  4e-33  Shewanella amazonensis SB2B  Bacteria  normal  0.56104  normal  1 
 
 
-
 
NC_007298  Daro_1400  two component LuxR family transcriptional regulator  37.44 
 
 		 216 aa  142  5e-33  Dechloromonas aromatica RCB  Bacteria  normal  0.973321  normal  0.0605156 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  35.41 
 
 		 214 aa  142  5e-33  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_010501  PputW619_1643  two component LuxR family transcriptional regulator  39.42 
 
 		 219 aa  141  6e-33  Pseudomonas putida W619  Bacteria  normal  0.118638  normal  1 
 
 
-
 
NC_010625  Bphy_5813  two component LuxR family transcriptional regulator  35.81 
 
 		 215 aa  140  9.999999999999999e-33  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.118405 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  38.46 
 
 		 219 aa  140  1.9999999999999998e-32  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  37.33 
 
 		 223 aa  140  1.9999999999999998e-32  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  39.15 
 
 		 217 aa  139  1.9999999999999998e-32  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  38.46 
 
 		 219 aa  139  3e-32  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  42.86 
 
 		 217 aa  139  3.9999999999999997e-32  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  40.2 
 
 		 208 aa  139  3.9999999999999997e-32  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  38.81 
 
 		 206 aa  139  3.9999999999999997e-32  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_007347  Reut_A1216  two component LuxR family transcriptional regulator  37.25 
 
 		 215 aa  139  4.999999999999999e-32  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  37.5 
 
 		 219 aa  138  4.999999999999999e-32  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_007958  RPD_2401  response regulator receiver  37.22 
 
 		 230 aa  138  6e-32  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0808908 
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  36.41 
 
 		 215 aa  137  2e-31  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  38.1 
 
 		 228 aa  137  2e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  43.02 
 
 		 215 aa  136  2e-31  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  36.22 
 
 		 216 aa  136  3.0000000000000003e-31  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  34.91 
 
 		 216 aa  135  3.0000000000000003e-31  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_011666  Msil_2019  two component transcriptional regulator, LuxR family  37.91 
 
 		 223 aa  135  4e-31  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_008609  Ppro_2713  two component LuxR family transcriptional regulator  39.41 
 
 		 208 aa  135  4e-31  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  34.11 
 
 		 218 aa  135  5e-31  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  36.28 
 
 		 215 aa  135  5e-31  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_12543  Transcriptional regulator  31.19 
 
 		 207 aa  135  6.0000000000000005e-31  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.204025  n/a   
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  36.97 
 
 		 238 aa  135  7.000000000000001e-31  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.500036 
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  40.1 
 
 		 212 aa  134  8e-31  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  34.6 
 
 		 218 aa  134  8e-31  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  37.5 
 
 		 232 aa  134  8e-31  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_009439  Pmen_1563  two component LuxR family transcriptional regulator  38.92 
 
 		 214 aa  134  9.999999999999999e-31  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.241819 
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  36.71 
 
 		 223 aa  134  9.999999999999999e-31  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  35.89 
 
 		 221 aa  133  1.9999999999999998e-30  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  34.6 
 
 		 215 aa  133  1.9999999999999998e-30  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal  1 
 
 
-
 
NC_013037  Dfer_4502  two component transcriptional regulator, LuxR family  37.81 
 
 		 205 aa  134  1.9999999999999998e-30  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.438194 
 
 
-
 
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