| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_41040 |
|---|
| Symbol | |
|---|
| ID | 7762988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 4139526 |
|---|
| End bp | 4140152 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643806962 |
|---|
| Product | Two-component response regulator, LuxR family |
|---|
| Protein accession | YP_002801213 |
|---|
| Protein GI | 226946140 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.136918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCCG GCAACCCGAT CCGGATCGTC CTGGTCGACG ATCACGCACT GGTACGCGAG
GGCATCCGTG CACTGCTGGC GGTCATGCCG CGGATCGAGG TGGTGGGCGA GGCGGAAAGC
GCCGCCGAAG CGCTCGAACT GCTCGACCGG CGGCCGGCGG ACCTGCTGCT GCTCGACATC
GGCCTGAAGG ACACCAACGG CCTGGAGCTG ACCCGTACCC TGGACCGGCA GTACCCGGAC
CTCAAGGTGC TGATCCTCAG CATGTACGAC AACATCGAAT ACGTCCGCAC CGCGATCCGC
GCCGGTGCCC GCGGCTATGT ACTGAAGGAC GCCTCGTCGC GGGAAATCGT CGCCGCCATC
GAGGCCATCG CCGCCGGCGG CAGCTTCTAT AGCTCGGAAG TCGCCCGCAA GCTGGCCGAC
CGCAGCTCGG ACCCGCAGAA CCTCACGCCC CGCGAGCACC AGATCCTGCG AATGCTCGCC
CAGGGGCTGG ACAGCAAGGC CATGGCCCGC GAACTCGATA TCAGCGTGCG CACGGTGGAG
ACCCATCGCC TGAGCATCCG CCGCAAGCTG AACATCGACG GCTCCGCGGC GCTGATCAAG
TACGCCCTGA GCGCTTCCCG GCTCTGA
|
|---|
| Protein sequence | MNSGNPIRIV LVDDHALVRE GIRALLAVMP RIEVVGEAES AAEALELLDR RPADLLLLDI
GLKDTNGLEL TRTLDRQYPD LKVLILSMYD NIEYVRTAIR AGARGYVLKD ASSREIVAAI
EAIAAGGSFY SSEVARKLAD RSSDPQNLTP REHQILRMLA QGLDSKAMAR ELDISVRTVE
THRLSIRRKL NIDGSAALIK YALSASRL
|
|---|
| |