More than 300 homologs were found in PanDaTox collection
for query gene Pnap_3523 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008781  Pnap_3523  two component LuxR family transcriptional regulator  100 
 
 		 224 aa  462  1e-129  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  59.05 
 
 		 220 aa  244  9e-64  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  57.56 
 
 		 214 aa  228  6e-59  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  57.56 
 
 		 214 aa  228  6e-59  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  57.56 
 
 		 214 aa  227  9e-59  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  57.56 
 
 		 214 aa  227  9e-59  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  57.56 
 
 		 214 aa  227  9e-59  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  57.56 
 
 		 214 aa  227  1e-58  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  57.01 
 
 		 215 aa  224  7e-58  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  57.01 
 
 		 215 aa  224  8e-58  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  57.01 
 
 		 215 aa  224  8e-58  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  57.01 
 
 		 215 aa  224  8e-58  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  57.01 
 
 		 215 aa  224  8e-58  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  57.01 
 
 		 215 aa  224  8e-58  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  57.01 
 
 		 215 aa  224  1e-57  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  56.6 
 
 		 215 aa  222  3e-57  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  56.59 
 
 		 214 aa  218  3.9999999999999997e-56  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  56.1 
 
 		 214 aa  216  2e-55  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  57.07 
 
 		 213 aa  214  5.9999999999999996e-55  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  57.07 
 
 		 214 aa  213  9.999999999999999e-55  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.10411 
 
 
-
 
NC_008752  Aave_1121  two component LuxR family transcriptional regulator  57.49 
 
 		 222 aa  213  9.999999999999999e-55  Acidovorax citrulli AAC00-1  Bacteria  normal  0.864132  normal  0.872256 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  54.15 
 
 		 213 aa  211  1e-53  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_4476  two component transcriptional regulator, LuxR family  55.71 
 
 		 215 aa  205  5e-52  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  52.15 
 
 		 217 aa  202  2e-51  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007952  Bxe_B0788  two component LuxR family transcriptional regulator  55.12 
 
 		 218 aa  202  5e-51  Burkholderia xenovorans LB400  Bacteria  normal  0.3296  normal  1 
 
 
-
 
NC_007347  Reut_A3419  LuxR response regulator receiver  49.27 
 
 		 231 aa  193  2e-48  Ralstonia eutropha JMP134  Bacteria  normal  0.393456  n/a   
 
 
-
 
NC_007973  Rmet_3576  two component LuxR family transcriptional regulator  50.72 
 
 		 228 aa  191  8e-48  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_3992  two component transcriptional regulator, LuxR family  52.17 
 
 		 214 aa  183  1.0000000000000001e-45  Variovorax paradoxus S110  Bacteria  normal  0.82671  n/a   
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  47.57 
 
 		 214 aa  177  1e-43  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  42.79 
 
 		 206 aa  172  2.9999999999999996e-42  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  44.23 
 
 		 213 aa  166  2.9999999999999998e-40  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011368  Rleg2_4527  two component transcriptional regulator, LuxR family  43.69 
 
 		 223 aa  166  2.9999999999999998e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.658241 
 
 
-
 
NC_012854  Rleg_6399  two component transcriptional regulator, LuxR family  42.23 
 
 		 214 aa  164  6.9999999999999995e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.139442 
 
 
-
 
NC_008752  Aave_4229  two component LuxR family transcriptional regulator  49.05 
 
 		 219 aa  164  1.0000000000000001e-39  Acidovorax citrulli AAC00-1  Bacteria  normal  0.720334  normal  0.28913 
 
 
-
 
NC_009831  Ssed_0905  putative nitrate/nitrite DNA-binding response regulator  42.31 
 
 		 206 aa  159  3e-38  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0826046  hitchhiker  0.00000533581 
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  40.28 
 
 		 212 aa  157  1e-37  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  40.93 
 
 		 213 aa  157  1e-37  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  38.25 
 
 		 218 aa  157  1e-37  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  40.93 
 
 		 213 aa  157  1e-37  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_009439  Pmen_0083  two component LuxR family transcriptional regulator  45.67 
 
 		 210 aa  157  2e-37  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  40.1 
 
 		 215 aa  155  4e-37  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  39.81 
 
 		 215 aa  155  4e-37  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  43.41 
 
 		 213 aa  155  5.0000000000000005e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  40.28 
 
 		 215 aa  154  1e-36  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  40.57 
 
 		 216 aa  153  2e-36  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_41040  Two-component response regulator, LuxR family  48.04 
 
 		 208 aa  152  2.9999999999999998e-36  Azotobacter vinelandii DJ  Bacteria  normal  0.136918  n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  41.28 
 
 		 233 aa  152  4e-36  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  41.9 
 
 		 206 aa  151  5.9999999999999996e-36  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_0443  two component LuxR family transcriptional regulator  42.92 
 
 		 213 aa  150  1e-35  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1971  two component transcriptional regulator, LuxR family  38.16 
 
 		 216 aa  150  2e-35  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008255  CHU_1317  response regulator  35.45 
 
 		 220 aa  149  2e-35  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  39.44 
 
 		 228 aa  149  3e-35  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_009952  Dshi_2345  two component transcriptional regulator  39.02 
 
 		 220 aa  149  4e-35  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.499423  normal  0.134206 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  42.65 
 
 		 218 aa  148  6e-35  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  39.52 
 
 		 216 aa  147  1.0000000000000001e-34  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  41.15 
 
 		 217 aa  147  1.0000000000000001e-34  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  41.67 
 
 		 221 aa  146  2.0000000000000003e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  39.81 
 
 		 232 aa  146  2.0000000000000003e-34  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  40.57 
 
 		 208 aa  147  2.0000000000000003e-34  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  42.31 
 
 		 228 aa  146  2.0000000000000003e-34  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_1873  response regulator receiver protein  37.79 
 
 		 215 aa  146  3e-34  Shewanella amazonensis SB2B  Bacteria  normal  0.56104  normal  1 
 
 
-
 
NC_011146  Gbem_2253  two component transcriptional regulator, LuxR family  39.61 
 
 		 216 aa  145  5e-34  Geobacter bemidjiensis Bem  Bacteria  normal  0.174263  n/a   
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  35.81 
 
 		 221 aa  145  6e-34  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  39.81 
 
 		 232 aa  145  7.0000000000000006e-34  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_1233  two component transcriptional regulator, LuxR family  40.38 
 
 		 220 aa  143  2e-33  Conexibacter woesei DSM 14684  Bacteria  normal  0.681342  normal  0.792953 
 
 
-
 
NC_007948  Bpro_0709  two component LuxR family transcriptional regulator  34.88 
 
 		 224 aa  142  4e-33  Polaromonas sp. JS666  Bacteria  normal  0.421893  normal  1 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  38.83 
 
 		 212 aa  142  4e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  36.53 
 
 		 222 aa  142  5e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  38.89 
 
 		 215 aa  141  7e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  38.76 
 
 		 244 aa  140  9.999999999999999e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  39.53 
 
 		 264 aa  141  9.999999999999999e-33  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  37.84 
 
 		 223 aa  139  3e-32  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  38.1 
 
 		 216 aa  138  4.999999999999999e-32  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  39.52 
 
 		 214 aa  138  7e-32  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_007614  Nmul_A0728  two component LuxR family transcriptional regulator  38.76 
 
 		 217 aa  138  7.999999999999999e-32  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  39.34 
 
 		 232 aa  137  8.999999999999999e-32  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  41.18 
 
 		 215 aa  137  1e-31  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  40.39 
 
 		 209 aa  137  1e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  35.85 
 
 		 229 aa  137  2e-31  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  36.97 
 
 		 215 aa  136  3.0000000000000003e-31  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  40.83 
 
 		 216 aa  136  3.0000000000000003e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  35.89 
 
 		 212 aa  136  3.0000000000000003e-31  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  38.5 
 
 		 218 aa  135  5e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  38.03 
 
 		 218 aa  135  5e-31  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  38.03 
 
 		 218 aa  135  5e-31  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  36.79 
 
 		 215 aa  135  6.0000000000000005e-31  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  35.65 
 
 		 216 aa  135  6.0000000000000005e-31  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  37.74 
 
 		 224 aa  134  9e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  38.1 
 
 		 215 aa  134  9.999999999999999e-31  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000161342  hitchhiker  0.00000159266 
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  34.68 
 
 		 219 aa  134  9.999999999999999e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  39.23 
 
 		 214 aa  134  9.999999999999999e-31  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  36.36 
 
 		 213 aa  134  9.999999999999999e-31  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  37.38 
 
 		 219 aa  133  1.9999999999999998e-30  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  34.23 
 
 		 222 aa  133  1.9999999999999998e-30  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  39.81 
 
 		 214 aa  134  1.9999999999999998e-30  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal  1 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  36.41 
 
 		 218 aa  133  1.9999999999999998e-30  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_010501  PputW619_1643  two component LuxR family transcriptional regulator  38.5 
 
 		 219 aa  132  3e-30  Pseudomonas putida W619  Bacteria  normal  0.118638  normal  1 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  35.1 
 
 		 220 aa  132  3e-30  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  38.57 
 
 		 219 aa  132  3e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  35.41 
 
 		 214 aa  132  3e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
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