More than 300 homologs were found in PanDaTox collection
for query gene Afer_1343 on replicon NC_013124
Organism: Acidimicrobium ferrooxidans DSM 10331



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013124  Afer_1343  methyl-accepting chemotaxis sensory transducer  100 
 
 
366 aa  690    Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1832  methyl-accepting chemotaxis sensory transducer  37.24 
 
 
373 aa  223  4.9999999999999996e-57  Geobacter lovleyi SZ  Bacteria  normal  0.230567  n/a   
 
 
-
 
NC_002939  GSU3156  methyl-accepting chemotaxis protein, putative  38.08 
 
 
365 aa  207  2e-52  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  40.34 
 
 
629 aa  139  6e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  40.34 
 
 
629 aa  139  6e-32  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  39.92 
 
 
629 aa  136  5e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  41.22 
 
 
629 aa  135  9e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  39.35 
 
 
640 aa  135  9.999999999999999e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  41.22 
 
 
632 aa  135  9.999999999999999e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  41.22 
 
 
632 aa  135  9.999999999999999e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  38.68 
 
 
542 aa  129  6e-29  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  36.09 
 
 
661 aa  129  1.0000000000000001e-28  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0889  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
540 aa  127  2.0000000000000002e-28  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  35.25 
 
 
549 aa  128  2.0000000000000002e-28  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_009901  Spea_2242  methyl-accepting chemotaxis sensory transducer  36.78 
 
 
664 aa  127  3e-28  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3453  methyl-accepting chemotaxis sensory transducer  39.02 
 
 
532 aa  127  3e-28  Geobacter sp. M21  Bacteria  n/a    normal  0.0235494 
 
 
-
 
NC_009901  Spea_3266  methyl-accepting chemotaxis sensory transducer  38.65 
 
 
543 aa  127  4.0000000000000003e-28  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.1 
 
 
521 aa  125  8.000000000000001e-28  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  34.88 
 
 
547 aa  125  1e-27  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.44 
 
 
626 aa  125  1e-27  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  38.68 
 
 
550 aa  125  1e-27  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_011126  HY04AAS1_0194  methyl-accepting chemotaxis sensory transducer  24.86 
 
 
622 aa  125  1e-27  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00784755  n/a   
 
 
-
 
NC_011146  Gbem_0809  methyl-accepting chemotaxis sensory transducer  38.73 
 
 
532 aa  124  2e-27  Geobacter bemidjiensis Bem  Bacteria  normal  0.826751  n/a   
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  36.62 
 
 
557 aa  125  2e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.27 
 
 
630 aa  124  2e-27  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  39.29 
 
 
549 aa  124  3e-27  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  35.37 
 
 
533 aa  123  4e-27  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.61 
 
 
521 aa  123  5e-27  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
532 aa  123  5e-27  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  34.76 
 
 
570 aa  123  6e-27  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  38.76 
 
 
545 aa  122  7e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  36.15 
 
 
569 aa  122  8e-27  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0529  methyl-accepting chemotaxis sensory transducer  38.99 
 
 
544 aa  122  8e-27  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  39.61 
 
 
534 aa  122  8e-27  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  39.44 
 
 
643 aa  122  9e-27  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  38.24 
 
 
528 aa  122  9.999999999999999e-27  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  35.85 
 
 
549 aa  122  9.999999999999999e-27  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.44 
 
 
628 aa  122  9.999999999999999e-27  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  37.65 
 
 
641 aa  122  9.999999999999999e-27  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.19 
 
 
526 aa  122  9.999999999999999e-27  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  39.44 
 
 
628 aa  122  9.999999999999999e-27  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_007519  Dde_0703  methyl-accepting chemotaxis sensory transducer  31.25 
 
 
805 aa  122  9.999999999999999e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.31 
 
 
521 aa  122  9.999999999999999e-27  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_013501  Rmar_2782  methyl-accepting chemotaxis sensory transducer  36.88 
 
 
601 aa  121  1.9999999999999998e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  0.163256  n/a   
 
 
-
 
NC_008609  Ppro_0724  methyl-accepting chemotaxis sensory transducer  37.26 
 
 
539 aa  121  1.9999999999999998e-26  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2264  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
819 aa  121  1.9999999999999998e-26  Desulfovibrio vulgaris DP4  Bacteria  normal  0.636482  normal 
 
 
-
 
NC_007519  Dde_1752  methyl-accepting chemotaxis sensory transducer  40.76 
 
 
897 aa  121  1.9999999999999998e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.10138  n/a   
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  37.56 
 
 
625 aa  121  1.9999999999999998e-26  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  40.38 
 
 
629 aa  120  3e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_011146  Gbem_0771  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
822 aa  120  3.9999999999999996e-26  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  35.82 
 
 
524 aa  120  3.9999999999999996e-26  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  38.68 
 
 
626 aa  120  3.9999999999999996e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  39.2 
 
 
639 aa  120  3.9999999999999996e-26  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_011146  Gbem_0798  methyl-accepting chemotaxis sensory transducer  36.89 
 
 
541 aa  120  3.9999999999999996e-26  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0767  putative methyl-accepting chemotaxis sensory transducer  33.92 
 
 
546 aa  119  6e-26  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.68 
 
 
624 aa  119  6e-26  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  40.28 
 
 
541 aa  119  7e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  39.51 
 
 
541 aa  119  7.999999999999999e-26  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_002939  GSU2652  methyl-accepting chemotaxis protein  37.25 
 
 
392 aa  119  7.999999999999999e-26  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.83 
 
 
524 aa  119  9e-26  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  38.65 
 
 
521 aa  118  9.999999999999999e-26  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  40.38 
 
 
521 aa  119  9.999999999999999e-26  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_007517  Gmet_0799  methyl-accepting chemotaxis sensory transducer  38.24 
 
 
388 aa  118  9.999999999999999e-26  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  39.05 
 
 
558 aa  119  9.999999999999999e-26  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  40.28 
 
 
605 aa  119  9.999999999999999e-26  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_009092  Shew_3044  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
688 aa  118  9.999999999999999e-26  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  35.78 
 
 
540 aa  117  1.9999999999999998e-25  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1891  methyl-accepting chemotaxis sensory transducer  33.46 
 
 
509 aa  118  1.9999999999999998e-25  Geobacter lovleyi SZ  Bacteria  normal  0.745334  n/a   
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.33 
 
 
524 aa  118  1.9999999999999998e-25  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_009439  Pmen_2444  methyl-accepting chemotaxis sensory transducer  39.81 
 
 
489 aa  118  1.9999999999999998e-25  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00221824  normal 
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  35.85 
 
 
547 aa  117  1.9999999999999998e-25  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_002939  GSU1374  methyl-accepting chemotaxis protein  36.07 
 
 
541 aa  117  3e-25  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2310  methyl-accepting chemotaxis sensory transducer  37.56 
 
 
492 aa  117  3e-25  Pseudomonas putida KT2440  Bacteria  normal  0.178377  decreased coverage  0.00000773933 
 
 
-
 
NC_012918  GM21_3719  methyl-accepting chemotaxis sensory transducer  37.33 
 
 
540 aa  117  3e-25  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  38.97 
 
 
538 aa  117  3e-25  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  38.24 
 
 
630 aa  117  3e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2907  chemotaxis sensory transducer  36.23 
 
 
541 aa  117  3e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.300582 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  35.29 
 
 
713 aa  117  3e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  34.54 
 
 
640 aa  117  3e-25  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  39.79 
 
 
739 aa  117  3e-25  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  38.28 
 
 
568 aa  117  3e-25  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.21 
 
 
624 aa  117  3.9999999999999997e-25  Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  38.21 
 
 
624 aa  117  3.9999999999999997e-25  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_009457  VC0395_A2016  methyl-accepting chemotaxis protein  35.32 
 
 
433 aa  117  3.9999999999999997e-25  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000104003  n/a   
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  35.85 
 
 
547 aa  117  3.9999999999999997e-25  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  38.03 
 
 
533 aa  117  3.9999999999999997e-25  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  37.32 
 
 
636 aa  117  3.9999999999999997e-25  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009512  Pput_3459  methyl-accepting chemotaxis sensory transducer  37.56 
 
 
492 aa  117  3.9999999999999997e-25  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.000433284 
 
 
-
 
NC_010501  PputW619_1752  methyl-accepting chemotaxis sensory transducer  38.5 
 
 
492 aa  116  5e-25  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.000000224536 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  38.21 
 
 
624 aa  117  5e-25  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  40.84 
 
 
541 aa  117  5e-25  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_011146  Gbem_3611  methyl-accepting chemotaxis sensory transducer  36.87 
 
 
540 aa  116  6e-25  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  35.41 
 
 
554 aa  116  6e-25  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  40 
 
 
521 aa  116  6e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3293  methyl-accepting chemotaxis sensory transducer  36.71 
 
 
720 aa  116  6e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.601  n/a   
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  36.7 
 
 
542 aa  116  6e-25  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  34.93 
 
 
554 aa  116  6.9999999999999995e-25  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.07 
 
 
524 aa  115  7.999999999999999e-25  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.33 
 
 
546 aa  115  7.999999999999999e-25  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  37.38 
 
 
626 aa  116  7.999999999999999e-25  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
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