More than 300 homologs were found in PanDaTox collection
for query gene Acid345_2902 on replicon NC_008009
Organism: Candidatus Koribacter versatilis Ellin345



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008009  Acid345_2902  LuxR family transcriptional regulator  100 
 
 
153 aa  306  9e-83  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_2289  regulatory protein LuxR  35.33 
 
 
151 aa  106  1e-22  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00301716 
 
 
-
 
NC_009511  Swit_2814  LuxR family transcriptional regulator  44.14 
 
 
146 aa  99.8  1e-20  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0940527 
 
 
-
 
NC_008347  Mmar10_0333  LuxR family transcriptional regulator  37.78 
 
 
141 aa  94.7  4e-19  Maricaulis maris MCS10  Bacteria  normal  0.800894  normal  0.0115404 
 
 
-
 
NC_010338  Caul_1533  LuxR family transcriptional regulator  34.64 
 
 
137 aa  90.5  7e-18  Caulobacter sp. K31  Bacteria  normal  0.717435  normal  0.7082 
 
 
-
 
NC_004578  PSPTO_1151  transcriptional regulator, LuxR family  50.63 
 
 
910 aa  72.8  0.000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_19850  putative transcriptional regulator  44.12 
 
 
827 aa  71.6  0.000000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.326832  normal 
 
 
-
 
NC_007492  Pfl01_4706  ATP-dependent transcription regulator LuxR  55.74 
 
 
911 aa  71.2  0.000000000005  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.157543 
 
 
-
 
NC_011831  Cagg_2575  ATP-dependent transcriptional regulator, MalT-like, LuxR family  54.84 
 
 
917 aa  71.2  0.000000000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1706  transcriptional regulator  59.02 
 
 
827 aa  70.9  0.000000000006  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0993  regulatory protein, LuxR  48.75 
 
 
920 aa  70.1  0.00000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.962183  normal 
 
 
-
 
NC_008463  PA14_13150  putative transcriptional regulator  54.1 
 
 
906 aa  69.3  0.00000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.697366  normal 
 
 
-
 
NC_009439  Pmen_3658  regulatory protein, LuxR  45.88 
 
 
914 aa  69.3  0.00000000002  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1186  transcriptional regulator  54.1 
 
 
906 aa  69.3  0.00000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1626  two component LuxR family transcriptional regulator  48.65 
 
 
194 aa  68.6  0.00000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.947018 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  45.16 
 
 
211 aa  68.6  0.00000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  56.34 
 
 
231 aa  68.2  0.00000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013525  Tter_0530  transcriptional regulator, LuxR family  45.35 
 
 
217 aa  67.4  0.00000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  59.68 
 
 
224 aa  67.4  0.00000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_002947  PP_0767  LuxR family transcriptional regulator  52.46 
 
 
905 aa  67  0.00000000008  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0794  regulatory protein, LuxR  52.46 
 
 
905 aa  67  0.00000000008  Pseudomonas putida F1  Bacteria  normal  normal  0.23816 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  57.38 
 
 
212 aa  66.6  0.0000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  59.02 
 
 
226 aa  66.6  0.0000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013235  Namu_0608  two component transcriptional regulator, LuxR family  55.74 
 
 
228 aa  66.6  0.0000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1011  two component transcriptional regulator, LuxR family  38.52 
 
 
203 aa  66.2  0.0000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.109267 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  50 
 
 
216 aa  66.2  0.0000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  50 
 
 
258 aa  67  0.0000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  52.46 
 
 
225 aa  66.6  0.0000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009767  Rcas_1228  LuxR family transcriptional regulator  50.82 
 
 
204 aa  66.2  0.0000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.118696  normal 
 
 
-
 
NC_010501  PputW619_4422  ATP-dependent transcription regulator LuxR  52.46 
 
 
905 aa  66.6  0.0000000001  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  42.45 
 
 
216 aa  65.9  0.0000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_008463  PA14_41800  putative transcriptional regulator  57.38 
 
 
907 aa  65.5  0.0000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  47.44 
 
 
213 aa  65.5  0.0000000002  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  37.98 
 
 
234 aa  66.2  0.0000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_009439  Pmen_2538  regulatory protein, LuxR  53.03 
 
 
907 aa  65.9  0.0000000002  Pseudomonas mendocina ymp  Bacteria  normal  0.896851  normal  0.0163895 
 
 
-
 
NC_012669  Bcav_2482  two component transcriptional regulator, LuxR family  50.75 
 
 
208 aa  66.2  0.0000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0211915  normal  0.642006 
 
 
-
 
NC_009656  PSPA7_3547  transcriptional regulator  57.38 
 
 
907 aa  65.5  0.0000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  52.05 
 
 
206 aa  65.5  0.0000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_1981  two component transcriptional regulator, LuxR family  55.74 
 
 
222 aa  65.9  0.0000000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  65.38 
 
 
235 aa  65.1  0.0000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  46.34 
 
 
212 aa  65.5  0.0000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4163  two component transcriptional regulator, LuxR family  46.48 
 
 
208 aa  65.1  0.0000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.296115  normal  0.698078 
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  49.33 
 
 
229 aa  65.1  0.0000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1682  two component LuxR family transcriptional regulator  52.46 
 
 
220 aa  65.1  0.0000000003  Opitutus terrae PB90-1  Bacteria  normal  normal  0.800734 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  59.62 
 
 
234 aa  65.5  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  52.46 
 
 
207 aa  65.1  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_010322  PputGB1_0808  ATP-dependent transcription regulator LuxR  50.82 
 
 
905 aa  65.1  0.0000000003  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  45.98 
 
 
241 aa  65.1  0.0000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_009523  RoseRS_0799  response regulator receiver protein  50.82 
 
 
204 aa  65.5  0.0000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.403434 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  50 
 
 
213 aa  64.7  0.0000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  48.78 
 
 
239 aa  64.7  0.0000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0882  LuxR family transcriptional regulator  39.6 
 
 
253 aa  64.7  0.0000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  43.37 
 
 
209 aa  64.7  0.0000000005  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  52.46 
 
 
217 aa  64.7  0.0000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  53.23 
 
 
226 aa  64.7  0.0000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  56.45 
 
 
225 aa  64.7  0.0000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  46.34 
 
 
209 aa  64.3  0.0000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  55.74 
 
 
207 aa  64.3  0.0000000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3277  transcriptional regulator, LuxR family  54.1 
 
 
224 aa  64.3  0.0000000006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2586  two component transcriptional regulator, LuxR family  48.75 
 
 
223 aa  64.3  0.0000000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.646343  normal 
 
 
-
 
NC_009972  Haur_1506  ATP-dependent transcription regulator LuxR  52.46 
 
 
876 aa  64.3  0.0000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  52.11 
 
 
227 aa  64.3  0.0000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009439  Pmen_1136  regulatory protein, LuxR  42.55 
 
 
868 aa  63.9  0.0000000008  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.87643 
 
 
-
 
NC_007348  Reut_B4759  regulatory protein, LuxR  50.79 
 
 
913 aa  63.5  0.0000000009  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  45.07 
 
 
221 aa  63.2  0.000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007410  Ava_B0029  two component LuxR family transcriptional regulator  44.26 
 
 
220 aa  63.2  0.000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.268532  n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  54.1 
 
 
211 aa  63.5  0.000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  49.28 
 
 
238 aa  63.2  0.000000001  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_013947  Snas_0625  two component transcriptional regulator, LuxR family  53.97 
 
 
216 aa  63.5  0.000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.732521  normal 
 
 
-
 
NC_008578  Acel_0973  two component LuxR family transcriptional regulator  52.46 
 
 
216 aa  63.2  0.000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.255067  normal  0.404517 
 
 
-
 
NC_013739  Cwoe_0403  transcriptional regulator, LuxR family  47.3 
 
 
981 aa  63.5  0.000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.106797 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  48.33 
 
 
218 aa  63.2  0.000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0655  two component LuxR family transcriptional regulator  45.83 
 
 
194 aa  63.5  0.000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  49.28 
 
 
250 aa  63.2  0.000000001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_013235  Namu_4745  two component transcriptional regulator, LuxR family  51.52 
 
 
209 aa  62.8  0.000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.23 
 
 
229 aa  62.4  0.000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  53.33 
 
 
209 aa  62.4  0.000000002  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  50 
 
 
208 aa  62.8  0.000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  51.39 
 
 
224 aa  62.8  0.000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  51.56 
 
 
222 aa  62.4  0.000000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  53.23 
 
 
209 aa  62.8  0.000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  38.14 
 
 
212 aa  62.4  0.000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  54.1 
 
 
253 aa  62.4  0.000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2693  regulatory protein, LuxR  50 
 
 
891 aa  62.8  0.000000002  Marinobacter aquaeolei VT8  Bacteria  normal  0.602772  n/a   
 
 
-
 
NC_013131  Caci_5878  two component transcriptional regulator, LuxR family  54.1 
 
 
441 aa  62.4  0.000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.464013 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.61 
 
 
236 aa  62.8  0.000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  50 
 
 
227 aa  62.4  0.000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  37.4 
 
 
223 aa  62.8  0.000000002  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_009767  Rcas_4222  ATP-dependent transcription regulator LuxR  50.82 
 
 
309 aa  62.4  0.000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.157864 
 
 
-
 
NC_009953  Sare_4229  two component LuxR family transcriptional regulator  50 
 
 
270 aa  61.6  0.000000003  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.104641 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  45.57 
 
 
221 aa  62  0.000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  50.68 
 
 
217 aa  62  0.000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  57.69 
 
 
234 aa  62  0.000000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  55.77 
 
 
237 aa  61.6  0.000000003  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  57.69 
 
 
303 aa  62  0.000000003  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  52.46 
 
 
226 aa  62  0.000000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009380  Strop_3839  regulatory protein, LuxR  52.38 
 
 
268 aa  62  0.000000003  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  52.46 
 
 
209 aa  62  0.000000003  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5333  transcriptional regulator, LuxR family  44.87 
 
 
992 aa  62  0.000000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0637  two component transcriptional regulator, LuxR family  48.48 
 
 
229 aa  62  0.000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.565019 
 
 
-
 
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