| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1682 |
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| Symbol | |
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| ID | 6205001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2067288 |
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| End bp | 2067950 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641691329 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001818566 |
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| Protein GI | 182413500 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.800734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCGCA TTCGCCTGCT GCTCGTCGAT GATCAGTCGC TCTTTCGCGA GGGATTACGG
CTGCTGCTCG CCCAGCAGCC GGATCTCGAG ATTGTCGCTG AAGCGGCGAA CGGAGAAGAA
GCCATCGCCG CGGCGCAGCG GCTGGCCCCC GCCGTCGTGC TGATGGATTT GCGCATGCCC
GTGATGAATG GCGTCGAGGC CACGCGCCGA CTGATGGCCG GAAATTTTGC CGGCCGCATC
CTCGTTCTCA CCACGTTTGA GGAGGACGAG GAGGTGTTCG CTGCACTCGC CGCCGGCGCC
GCCGGCTACC TGCTCAAGGC TTCGCCCTCC GACAAGCTCA TCGCCGCGAT CCGACTCACC
GCGCGCGGCG AGTCGTTTCT CGAGCCGTCG GTCACCGCCA AGGTGCTCGC GCATTTTTCC
CGGCTCGCGC AGCAAGCGCC GCGGCCACCC AAGCCGCCGC CGCCGCTCGC TGAGCCACTC
TCCGTGCGCG AGCGCGAGGT CCTGGGGCTG CTCGCTGAGG GCCGGAGCAA CAAGGAAATC
GCCAGCGCGC TCGCGATCGC CGAGGGCACG GTGAAGAATC ACATGAGCAA CGTGCTCGGC
AAGCTCGGCG CGCTCGACCG CACTCAAGCC GCGCTGCGCG GCCGCGAGCT CGGTTTGGTG
TAG
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| Protein sequence | MKRIRLLLVD DQSLFREGLR LLLAQQPDLE IVAEAANGEE AIAAAQRLAP AVVLMDLRMP
VMNGVEATRR LMAGNFAGRI LVLTTFEEDE EVFAALAAGA AGYLLKASPS DKLIAAIRLT
ARGESFLEPS VTAKVLAHFS RLAQQAPRPP KPPPPLAEPL SVREREVLGL LAEGRSNKEI
ASALAIAEGT VKNHMSNVLG KLGALDRTQA ALRGRELGLV
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