More than 300 homologs were found in PanDaTox collection
for query gene Caci_0637 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_0637  two component transcriptional regulator, LuxR family  100 
 
 
229 aa  452  1.0000000000000001e-126  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.565019 
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  54.67 
 
 
224 aa  209  2e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  52.05 
 
 
221 aa  190  2e-47  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  45.54 
 
 
220 aa  188  5e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  46.88 
 
 
222 aa  187  1e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  47.56 
 
 
223 aa  186  2e-46  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  46.88 
 
 
218 aa  184  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  46.52 
 
 
230 aa  183  2.0000000000000003e-45  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  47.58 
 
 
229 aa  183  2.0000000000000003e-45  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  47.53 
 
 
220 aa  183  2.0000000000000003e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  43.3 
 
 
224 aa  182  3e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  48.25 
 
 
227 aa  182  4.0000000000000006e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_014158  Tpau_1989  two component transcriptional regulator, LuxR family  52.47 
 
 
229 aa  182  4.0000000000000006e-45  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  46.75 
 
 
230 aa  182  5.0000000000000004e-45  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  47.09 
 
 
220 aa  181  9.000000000000001e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  47.06 
 
 
222 aa  180  1e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  46.61 
 
 
225 aa  180  1e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  48.37 
 
 
217 aa  180  1e-44  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  43.05 
 
 
232 aa  180  2e-44  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  45.09 
 
 
218 aa  179  2e-44  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  45.58 
 
 
218 aa  179  2.9999999999999997e-44  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  41.44 
 
 
216 aa  179  2.9999999999999997e-44  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  43.05 
 
 
232 aa  179  4e-44  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  47.81 
 
 
227 aa  178  4.999999999999999e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  47.27 
 
 
212 aa  178  4.999999999999999e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  46.82 
 
 
207 aa  178  5.999999999999999e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  45.81 
 
 
226 aa  178  7e-44  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  51.36 
 
 
221 aa  177  8e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  43.05 
 
 
232 aa  177  1e-43  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  43.23 
 
 
228 aa  177  1e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  45.58 
 
 
230 aa  176  2e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  48.23 
 
 
221 aa  177  2e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  48.02 
 
 
226 aa  176  2e-43  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  45.21 
 
 
217 aa  176  2e-43  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  43.12 
 
 
219 aa  176  3e-43  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  45.37 
 
 
222 aa  176  3e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  46.64 
 
 
219 aa  176  3e-43  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  45.74 
 
 
227 aa  176  3e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.95 
 
 
226 aa  176  3e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  47.14 
 
 
225 aa  176  3e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  45.81 
 
 
226 aa  176  4e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  45.54 
 
 
216 aa  175  5e-43  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  44.8 
 
 
221 aa  174  9.999999999999999e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  42.79 
 
 
234 aa  174  9.999999999999999e-43  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_013131  Caci_5428  two component transcriptional regulator, LuxR family  56.74 
 
 
201 aa  174  9.999999999999999e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.358603 
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.28 
 
 
222 aa  174  9.999999999999999e-43  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  47.32 
 
 
215 aa  173  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  47.6 
 
 
224 aa  173  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  45.41 
 
 
219 aa  174  1.9999999999999998e-42  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  46.43 
 
 
224 aa  172  2.9999999999999996e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  45.33 
 
 
225 aa  172  3.9999999999999995e-42  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  42.92 
 
 
221 aa  172  3.9999999999999995e-42  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  46.33 
 
 
226 aa  171  5.999999999999999e-42  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  46.26 
 
 
225 aa  171  6.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  43.5 
 
 
218 aa  171  6.999999999999999e-42  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  46.35 
 
 
234 aa  171  7.999999999999999e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  45.13 
 
 
225 aa  171  9e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  43.5 
 
 
230 aa  171  9e-42  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4528  response regulator receiver  45.87 
 
 
213 aa  171  1e-41  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  45.89 
 
 
226 aa  170  1e-41  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  47.53 
 
 
214 aa  170  1e-41  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  45.78 
 
 
212 aa  171  1e-41  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3475  response regulator receiver  44.84 
 
 
228 aa  170  2e-41  Gordonia bronchialis DSM 43247  Bacteria  normal  0.849127  n/a   
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  47.27 
 
 
215 aa  169  2e-41  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  48.67 
 
 
224 aa  169  2e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  45.81 
 
 
222 aa  169  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.95 
 
 
222 aa  169  3e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  43.67 
 
 
224 aa  169  3e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  45.33 
 
 
241 aa  169  4e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  44.64 
 
 
219 aa  168  6e-41  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  41.89 
 
 
218 aa  168  6e-41  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  46.7 
 
 
213 aa  167  9e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  43.17 
 
 
220 aa  167  9e-41  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  40.09 
 
 
234 aa  167  9e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  45 
 
 
206 aa  167  1e-40  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  44.44 
 
 
217 aa  167  1e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  44.25 
 
 
221 aa  167  1e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  44.84 
 
 
211 aa  167  1e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  43.72 
 
 
226 aa  167  1e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  40.54 
 
 
237 aa  167  1e-40  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  41.85 
 
 
239 aa  167  1e-40  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  43.05 
 
 
228 aa  167  2e-40  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  46.19 
 
 
217 aa  166  2e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  45.95 
 
 
227 aa  166  2.9999999999999998e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.67 
 
 
229 aa  166  2.9999999999999998e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  44.14 
 
 
215 aa  166  2.9999999999999998e-40  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  44.75 
 
 
209 aa  166  2.9999999999999998e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  40.09 
 
 
237 aa  165  4e-40  Frankia sp. CcI3  Bacteria  normal  0.272345  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  42.24 
 
 
230 aa  166  4e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  40.54 
 
 
253 aa  166  4e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  44.64 
 
 
224 aa  166  4e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  44.93 
 
 
219 aa  166  4e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  42.67 
 
 
236 aa  165  5e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  44.35 
 
 
224 aa  165  5e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  43.36 
 
 
234 aa  165  5.9999999999999996e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  45.89 
 
 
235 aa  165  5.9999999999999996e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  45.05 
 
 
211 aa  164  6.9999999999999995e-40  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  45.02 
 
 
214 aa  164  8e-40  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  44.84 
 
 
223 aa  164  8e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  41.63 
 
 
228 aa  164  9e-40  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
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