More than 300 homologs were found in PanDaTox collection
for query gene Gbro_4528 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_4528  response regulator receiver  100 
 
 
213 aa  414  9.999999999999999e-116  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  51.36 
 
 
224 aa  187  1e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  46.3 
 
 
217 aa  168  7e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  45.12 
 
 
219 aa  166  2.9999999999999998e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  45.79 
 
 
225 aa  164  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  47.62 
 
 
220 aa  163  2.0000000000000002e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  47.85 
 
 
212 aa  162  3e-39  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  46.45 
 
 
217 aa  162  3e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  45.02 
 
 
222 aa  162  4.0000000000000004e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  38.5 
 
 
216 aa  160  1e-38  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  42.86 
 
 
217 aa  160  1e-38  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  45.28 
 
 
220 aa  160  2e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  43.5 
 
 
232 aa  160  2e-38  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  48.56 
 
 
225 aa  160  2e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  44.65 
 
 
226 aa  158  5e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  43.32 
 
 
226 aa  158  7e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_014158  Tpau_1989  two component transcriptional regulator, LuxR family  51.92 
 
 
229 aa  157  1e-37  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  43.6 
 
 
235 aa  157  1e-37  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_009664  Krad_2658  two component transcriptional regulator, LuxR family  46.67 
 
 
215 aa  157  1e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  44.81 
 
 
214 aa  157  1e-37  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  44.66 
 
 
233 aa  156  2e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  46.23 
 
 
218 aa  157  2e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  42.29 
 
 
230 aa  155  3e-37  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  43.18 
 
 
223 aa  155  3e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  43.84 
 
 
222 aa  156  3e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  44.81 
 
 
209 aa  155  5.0000000000000005e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  45.28 
 
 
215 aa  155  5.0000000000000005e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  44.6 
 
 
221 aa  155  6e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  42.25 
 
 
224 aa  154  9e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  45.58 
 
 
247 aa  154  9e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  39.83 
 
 
248 aa  154  9e-37  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  42.18 
 
 
232 aa  154  1e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_009664  Krad_2537  two component transcriptional regulator, LuxR family  42.29 
 
 
242 aa  154  1e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  44.02 
 
 
222 aa  154  1e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  40.76 
 
 
213 aa  154  1e-36  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  40.47 
 
 
218 aa  153  2e-36  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  43.33 
 
 
225 aa  153  2e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  44.81 
 
 
222 aa  152  2.9999999999999998e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  43.06 
 
 
225 aa  152  2.9999999999999998e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  42.86 
 
 
220 aa  152  4e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013131  Caci_0637  two component transcriptional regulator, LuxR family  45.87 
 
 
229 aa  152  4e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.565019 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  42.08 
 
 
224 aa  152  5e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  44.81 
 
 
212 aa  152  5e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  41.78 
 
 
219 aa  151  5e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.26 
 
 
225 aa  151  5.9999999999999996e-36  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  42.92 
 
 
226 aa  151  5.9999999999999996e-36  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  41.9 
 
 
206 aa  151  7e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  43.54 
 
 
221 aa  151  8e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  44.23 
 
 
214 aa  150  1e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.785726 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  44.17 
 
 
216 aa  150  1e-35  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  43.69 
 
 
234 aa  150  1e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  42.99 
 
 
223 aa  150  1e-35  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  44.65 
 
 
224 aa  150  2e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  45.07 
 
 
218 aa  149  2e-35  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.99 
 
 
221 aa  150  2e-35  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  44.19 
 
 
226 aa  149  2e-35  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  42.25 
 
 
224 aa  150  2e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  41.36 
 
 
223 aa  149  2e-35  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.2 
 
 
222 aa  149  3e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  42.72 
 
 
211 aa  149  3e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  41.4 
 
 
220 aa  149  4e-35  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  44.85 
 
 
208 aa  149  4e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  43.33 
 
 
219 aa  149  4e-35  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  46.19 
 
 
209 aa  149  4e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  40.76 
 
 
213 aa  149  4e-35  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  41.12 
 
 
241 aa  148  5e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_0074  response regulator receiver protein  43.66 
 
 
207 aa  148  5e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  42.52 
 
 
225 aa  148  6e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_37860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.6 
 
 
221 aa  148  8e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  40.89 
 
 
231 aa  147  8e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  43.78 
 
 
229 aa  147  1.0000000000000001e-34  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.2 
 
 
222 aa  147  1.0000000000000001e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  37.16 
 
 
219 aa  147  1.0000000000000001e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  42.65 
 
 
209 aa  147  1.0000000000000001e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_014158  Tpau_0647  two component transcriptional regulator, LuxR family  39.52 
 
 
212 aa  147  1.0000000000000001e-34  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.518884  n/a   
 
 
-
 
NC_013411  GYMC61_1059  two component transcriptional regulator, LuxR family  38.73 
 
 
221 aa  147  1.0000000000000001e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  43.93 
 
 
236 aa  146  2.0000000000000003e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  42.72 
 
 
225 aa  146  2.0000000000000003e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  40.29 
 
 
211 aa  146  2.0000000000000003e-34  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  40.93 
 
 
224 aa  147  2.0000000000000003e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  41.23 
 
 
207 aa  146  2.0000000000000003e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  40.38 
 
 
234 aa  145  3e-34  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  41.35 
 
 
221 aa  146  3e-34  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  41.83 
 
 
220 aa  146  3e-34  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  40.74 
 
 
225 aa  145  4.0000000000000006e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  43.27 
 
 
213 aa  145  4.0000000000000006e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  39.91 
 
 
221 aa  145  4.0000000000000006e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_013947  Snas_3676  two component transcriptional regulator, LuxR family  41.98 
 
 
214 aa  145  5e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0625047  normal  0.0780809 
 
 
-
 
NC_013947  Snas_1509  two component transcriptional regulator, LuxR family  41.23 
 
 
221 aa  145  5e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.198395  normal  0.0597777 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  41.86 
 
 
227 aa  145  6e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013235  Namu_4067  two component transcriptional regulator, LuxR family  43.6 
 
 
218 aa  144  7.0000000000000006e-34  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.352272 
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  41.9 
 
 
207 aa  144  7.0000000000000006e-34  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  39.91 
 
 
219 aa  144  7.0000000000000006e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_010001  Cphy_0080  two component LuxR family transcriptional regulator  38.24 
 
 
212 aa  144  7.0000000000000006e-34  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  40.38 
 
 
218 aa  144  8.000000000000001e-34  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  41.2 
 
 
226 aa  144  1e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013947  Snas_0607  two component transcriptional regulator, LuxR family  40.28 
 
 
216 aa  144  1e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_19740  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.33 
 
 
216 aa  144  1e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682926  normal 
 
 
-
 
NC_008541  Arth_0485  two component LuxR family transcriptional regulator  43.01 
 
 
208 aa  144  1e-33  Arthrobacter sp. FB24  Bacteria  normal  0.0855535  n/a   
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  40.95 
 
 
217 aa  144  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
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