| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4422 |
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| Symbol | |
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| ID | 6113392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4883462 |
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| End bp | 4886179 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641624217 |
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| Product | ATP-dependent transcription regulator LuxR |
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| Protein accession | YP_001751271 |
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| Protein GI | 170723583 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT TGTCCCGTAC GCATGGAGTC GCCAGCCAGG CCGTGGGCCT GCTGGACGGG
CGTTTCTTCC GGCCGCCGCT GCCGCACGGC CACGTGCCGC GTGCGCGCCT GTGCCAGCGT
TTGCAGGCTG GCCTCAGCGG CCGTTTGTTG CTGGTCAATG CCCCGGCAGG CTTCGGCAAG
AGCTCCCTGG CCATCGAATT CTGCGAGGCG CTGCCCGACC ATTGGCGCAG CCTCTGGCTT
GGGCTCAGCC AGCGCGATGC TGACCCGGGC CGTTTTCTCG AACGCTTGCT TGAGGGTCTG
CAGCAGTACT GCCCGGCGTT GGGCGGCCAA GCCATGGGCC TGTTGAAAAT GCGCCAGCGC
CACCAACCCT TCGCGTTCGA GGAATGGATC GACGGCCTGC TCGACGAGTT GGCGTTGTAC
CTGCAAGCCG ATACACCCTT GCTGCTGGTA CTGGACGACT ATCACCTGGC CCAGGGGCCG
GTGCTCGATC GCTGCCTGCA GTTTTTTCTC AACCACTTGC CGGGCGGCTT GGTGTTGCTG
GTCACCAGCC GCCAGCGGCC AGACTGGCAC CTGGCGCGGC TGCGGCTCTC ACGGCAACTG
GTCGAAATCA ACGAGCAGGA ACTGCGCCTG ACGCCCGACG AGGCCCTGGC CGTTCTTGGT
CGCCAGCCTA CAGGCCTGCG CGGGCAGGCC TTGGACAACC TGATCCAGCG CAGCGACGGC
TGGGTTGCCG GGTTGCGGTT CTGGCAACTG GCAGCGAGTG AGTCAGGCGA CGAGCATGCG
CTGCCCCAGG CTCTGCATGG CGGGGAAGGG TTGATTCGCG ATTATCTGCT GGAAGAAGTC
ATCGAAATCC TGCCTGAGGA CGTGCAGGCG TTTCTGTTCG ACACTGCGTG CCAGGAGCGC
TTCTGCGCGG CGTTATGCGA TGCCCTGCGT CAGCGCGACG ACAGCGCGGC CATCCTTCGT
TACCTGCAGG CTCACCAGGT GTTTCTGGTG CCGCTGGACG AGCATGGCCA CTGGTATCGA
TACCATCACC TGTTCTCCGA CCTGTTGCGC AGCCGCCAGT CCAATGAACC GCAGGCGCGT
CTGCACCTGC GTGCCTGCCG TTGGTTTCAG GCTCAAGGGC TGCTTGACGA AGCGGTGGAG
CAAGCCCTGC GGGCCGGCCA TCTGGACGTC GCCGCCGACC TGGTGCAGAG CCTGTCGGAG
GAGCAGTTGC TGGCCGAGCA GAACGTCGGC ATGTTGCTGC GCTGGAAGAT GGACTTGCCC
GACAGCCTGC TGATCAGTAC GCCCCGGCTC ATCGTGCTGT ACAGCTGGGC GCTGGGCCTG
GCCTGCCAGT TGGACGCAGC CGAAGAGCTG GCAAGCTACC TAAGCCGCTT TTTGCCGGCA
CCTTCAGCCA CCGCGCAAAG GTCCATGCTG GCCCAGTGGC TGGCCTTGAG CGGGGTAATT
GCGCGTGGCC GCGGTGATCG CGAACGCACC CTGGCTTATT GTGGTGAGGC GCTGCAAAGC
CTTCCGTGCA AACGTTATGG GCAGCGTCTG GTGTGCCTGT CGACGCTGTC CAACCTGGCC
ATTGCCGATG GCGACTTCTG GCGAGCGCGT GGTTGGAACC GCGAGGCGCT GGAGTTGGCC
CAGCGGGTTG GCAACCCTTT GTTCGAAGCT TTGGCGCACT ACGACCGTGC CCGGGTGCTA
CATGCCAGGG GCGAGGCATT GCGCGCGCTG GATGAGGTGC GCCAGGGTCT GCAACGCCTC
CAGGGTCTTT CGGCCCAGCG GCTGTATGCC GTGCGCGCGC GGCTGACCTT GTACGAGGGT
TACCTGCTAG TGACGCGCCT GCAGCCTGCG CAAGGGCGTG CGCGCTTGCG TGCGGGGCTG
GGTGAGGCGC GCGCCTGTCG CGATATCAGC GTGCTGATAG GCCACTGTGT GATCGCTACC
CTCGACGGCC GCGAAGGGCA CTACGCCGAC GCCTTCGCCG AGTTGGCCGA AGCCGAGAGG
CTGATGCACA TCTGGGATGT GCCGCCGATC TTCTACCTGG CCATGATCAC GCTGGTGAAG
TGCGAGTTGT GGCTGGCGCA GGGGCGTACC GACCTGGCCG AGTCCTGGTT GCTGCGTCTG
GGCCAGACCT ACGGTGGCGA GCAGCCTGCG GCGGCGCCGG AGTTCCACCC GTTGTTACCG
CTGCACATCG AATTGCAGCA GGCCTTGCTC GAACGCATCC AGGGCCGCAG CGAGGATGCC
GCAGCGCGCT TGCGCGGCCT GGTCGAGCGC GGGCAGGTCG GCGGCGGCAT GATGCTGACC
CTGAGCGCGC TGTGCCAATG GATCGCCTTG TTGCTGGAGC AGGGGGGCGA GGCGCAGGCT
GCAGAGCGCT TGCCCATGGC CCTGGCAGCG GCCCAAGGCG GGGTGATGCA GCCGTTTCAG
CGGTTGATCG AGCTGCACCC GCTGTGGCTT CGCGAGCAGT TGCTCGCACG CCCTGCCTGC
AAGGTTCAGG TCGAGCTGCT GGCTCGTCTG CCCGAGCTGG CGGCGCCGGG CAGCGGCACG
TGCGAGTCGC TGAGTGGTCG TGAGCTGGCA GTGCTGGAAT TGATCGCCCA AGGCTGCTCG
AACCAGCAGA TCAGCGAGCG CCTGTTCATC TCGCTGCACA CGGTCAAAAC CCACGCCAGC
CATATCAACA GCAAACTCGG GGTGGAGCGG CGTACCCAGG CGGTGGCACG GGCCAAGTCG
CTGGGCCTGC TGGCCTGA
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| Protein sequence | MTDLSRTHGV ASQAVGLLDG RFFRPPLPHG HVPRARLCQR LQAGLSGRLL LVNAPAGFGK
SSLAIEFCEA LPDHWRSLWL GLSQRDADPG RFLERLLEGL QQYCPALGGQ AMGLLKMRQR
HQPFAFEEWI DGLLDELALY LQADTPLLLV LDDYHLAQGP VLDRCLQFFL NHLPGGLVLL
VTSRQRPDWH LARLRLSRQL VEINEQELRL TPDEALAVLG RQPTGLRGQA LDNLIQRSDG
WVAGLRFWQL AASESGDEHA LPQALHGGEG LIRDYLLEEV IEILPEDVQA FLFDTACQER
FCAALCDALR QRDDSAAILR YLQAHQVFLV PLDEHGHWYR YHHLFSDLLR SRQSNEPQAR
LHLRACRWFQ AQGLLDEAVE QALRAGHLDV AADLVQSLSE EQLLAEQNVG MLLRWKMDLP
DSLLISTPRL IVLYSWALGL ACQLDAAEEL ASYLSRFLPA PSATAQRSML AQWLALSGVI
ARGRGDRERT LAYCGEALQS LPCKRYGQRL VCLSTLSNLA IADGDFWRAR GWNREALELA
QRVGNPLFEA LAHYDRARVL HARGEALRAL DEVRQGLQRL QGLSAQRLYA VRARLTLYEG
YLLVTRLQPA QGRARLRAGL GEARACRDIS VLIGHCVIAT LDGREGHYAD AFAELAEAER
LMHIWDVPPI FYLAMITLVK CELWLAQGRT DLAESWLLRL GQTYGGEQPA AAPEFHPLLP
LHIELQQALL ERIQGRSEDA AARLRGLVER GQVGGGMMLT LSALCQWIAL LLEQGGEAQA
AERLPMALAA AQGGVMQPFQ RLIELHPLWL REQLLARPAC KVQVELLARL PELAAPGSGT
CESLSGRELA VLELIAQGCS NQQISERLFI SLHTVKTHAS HINSKLGVER RTQAVARAKS
LGLLA
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