| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0794 |
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| Symbol | |
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| ID | 5190366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 886707 |
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| End bp | 889424 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585254 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001266142 |
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| Protein GI | 148546040 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.23816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATC TGTCCCGTAC GCATGGATTC GCGAGTCAGG CCCTTGGCCT GCGGGACGGG
CGTTTCTTCC GGCCGCCGCT GCCGGATGGC CATGTGCAGC GCCTGCGTTT GTGCCAGCGG
CTGGAAGCCG GTTTGGGCGG GCGGCTGCTG CTGGTCAATG CCCCGGCGGG TTTCGGCAAA
AGCTCCCTGG CCATCGAGTT TTGCGAAACA CTGCCCGAGC ACTGGCGTAG CCTGTGGCTT
GGCCTGAGCC AGCGGGACGC CGACCCTGGC CGCTTCCTTG AGCGCTTGCT TGAAGGCCTG
CAGCAATACT GCCCGGCACT GGGCGGCCAG GCCATGGGCC TGCTGAAAAT GCGCCAGCGC
CATCAGCCGT TTGCCTTTGA AGAGTGGCTC GACGGCCTGC TCGACGAGCT GGCGCTGTAC
CTACAAGCTG ATACGCCGCT GCTGCTGGTA CTGGACGACT ATCACCTGGC CCAAGGGCCG
GTGCTTGACC GTTGCCTGCA GTTCTTCCTC AATCATCTGC CACCCGGCCT GGTGTTGCTG
GTGACCAGCC GCCAGCGGCC AGACTGGCAC CTGGCGCGGC TGCGCCTGTC CCGACAGTTG
GTCGAGCTTA ACGAACAGGA CCTGCGCCTC ACCGCGGATG AGTCGCTGGC AGTGATCGGT
CGCCAGCCTA CCGGCCTGCG CGGCCAGGCA CTGGACAACC TGATCCAGCG CAGCGACGGC
TGGGTCGCCG GGCTGCGTTT CTGGCAACTG GCGGCCAGCG ACAGCGCCGA CGAGCAAGCC
TTGCCCCAGG CGCTGCATGG TGGCGAGGGT CTGATCCGCG ACTACCTGCT TGAAGAAGTC
ATCGATAGGC TACCTGCAGA CGTGCAGGCT TTCTTGTACG AAACCGCCTG CCAGGAGCGT
TTCTGCGCTC CGCTTTGCGA TGCGATGCGT GGCCGCCACG ACAGTGCCGC CGTCCTGACC
TTCCTGCAGG CGCATCAGGT GTTCCTTGTG CCGCTGGACG AGCATGGGCA CTGGTTCCGC
TATCACCATT TGTTCTCCGA CCTGCTGCGT AGCCGACAGG CGAGCGAATC GCAGGTCGCT
CTGCATTTGC GGGCCTGCCG CTGGTTTGAA GCTCAGGACC TGCTGGACGA GGCGGTGGAG
CAGGCTTTGC GTGCCGGCCA CCTCGATGTT GCCGCCGACC TGGTGCAAAG TTTGTCCGAA
GAGCAACTGC TGGCCGAGCA GAACGTCGGC ATGTTGCTGC GTTGGAAGAT GGACCTGCCC
GACAGTCTGT TGATCAGCAC GCCGCGGCTG ATCGTGCTGT ACAGCTGGGC GTTGGGGCTG
GCTTGCCAGC TGGATGCTGC CGAAGAACTG GCCGGCTACC TCAGTCGCTT TCTGCCCGCG
CCTTCGGCGA CCGCGCAAAA GTCGATGCTG GCCCAATGGC TGGCACTCAG TGGGGTCATT
GCCCGTGGCC GTGGCGACCG CGAGCGCACC CTGGCCTATT GCGGCGAAGC GTTACAGAGC
CTGCCGAGCA AGCGCTACGG CCAACGCCTG GTGTGTTTGT CGACGCTGTC CAACCTGGCC
ATTGCCGATG GCGACTTCTG GCGGGCCCGA GGCTGGAACC GCGAGGCCCT GGAGCTGGCC
CAGCGGGTCG GTAACCCCTT GTTCGAGGCG CTGGCGCATT ACGATCGGGC GCGGGTGCTG
CATGCCCGTG GCGAGGTGCT GCGCGCGCTG GACGAAGTGC GCCAGGGGCT ACAACGTCTG
CAAGGGCTTT CCGCACAGCG GCTGTATGCC GTGCGTGCGC GGCTGACGCT TTATGAAGGT
TACCTGCTGG TCTCGCGTCT GCAGCCAGCT CAGGGCCGCG CGCGTTTGCG CGCCGGGCTG
GGTGAGGCGC GAGCGTGCCG GGACATCAGT GTGCTCATCG GTCATTGCGT GATTGCCACG
CTCGATGGCC GGGAAGGTCA CTTTGCCGAG GCCTTTGCCG AACTGGCCGA GGCCGAGCGC
TTGATGCACA TCTGGGATGT GCCCCCGGTC TACTACCTGG CCATGATTAC CCTGGTCAAA
TGCGAACTGT GGCTGGCCCA GGGACGTACC GACCTGGCGG AGTCCTGGCT GCAGCGCCTG
GGCCAGACCT ATGGCGGCGA GCAGCCGGCG GCGGCACCGG AATTCCATCC GCTCCTGCCG
TTGCACATTG CGTTGCAGCA GGCAGCGCTC GATCGCATCC AGTTGCGTAG CGACGATGCC
GTGCAGCGCC TGGCATGCCT GGTAAAGCGC GGCCAGGCCA GTGGCGGCAT GATGCTCGCC
GTCAGCGCCT TGAGCCAATG GCTTTCCCTG CTGTTGGACG AAGGCAAGGA AGGGCAGGCC
GCGCAGTTGC TGCCAAGTTT GCTGGAAGCG GCGCATGGCG GTGTGATGCA GCCAATGCAG
CCACTGCTGG AAAAACACCC GCAATGGCTT CATGAACAAC TGCAGGCAGG CGCCGCTTGC
CCGGTGCAGG CGGAACTGCT CAAGCACCTG CCGCCAGTGC CAATCGCCAG TACGGGCAAC
GGCGAAGCGC TGAGTGGCCG CGAAATGGCT GTGCTCGAAC TGATTGCCCA AGGCTGTTCC
AATCAGCAGA TCAGCGAGCG GCTGTTCATT TCCCTGCACA CGGTGAAGAC CCACGCCAGC
CACATCAACA GCAAGTTGGG CGTGGAGCGG CGCACCCAGG CGGTGGCCAA GGCCAAATCC
CTGGGGTTGC TGGCGTGA
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| Protein sequence | MTDLSRTHGF ASQALGLRDG RFFRPPLPDG HVQRLRLCQR LEAGLGGRLL LVNAPAGFGK
SSLAIEFCET LPEHWRSLWL GLSQRDADPG RFLERLLEGL QQYCPALGGQ AMGLLKMRQR
HQPFAFEEWL DGLLDELALY LQADTPLLLV LDDYHLAQGP VLDRCLQFFL NHLPPGLVLL
VTSRQRPDWH LARLRLSRQL VELNEQDLRL TADESLAVIG RQPTGLRGQA LDNLIQRSDG
WVAGLRFWQL AASDSADEQA LPQALHGGEG LIRDYLLEEV IDRLPADVQA FLYETACQER
FCAPLCDAMR GRHDSAAVLT FLQAHQVFLV PLDEHGHWFR YHHLFSDLLR SRQASESQVA
LHLRACRWFE AQDLLDEAVE QALRAGHLDV AADLVQSLSE EQLLAEQNVG MLLRWKMDLP
DSLLISTPRL IVLYSWALGL ACQLDAAEEL AGYLSRFLPA PSATAQKSML AQWLALSGVI
ARGRGDRERT LAYCGEALQS LPSKRYGQRL VCLSTLSNLA IADGDFWRAR GWNREALELA
QRVGNPLFEA LAHYDRARVL HARGEVLRAL DEVRQGLQRL QGLSAQRLYA VRARLTLYEG
YLLVSRLQPA QGRARLRAGL GEARACRDIS VLIGHCVIAT LDGREGHFAE AFAELAEAER
LMHIWDVPPV YYLAMITLVK CELWLAQGRT DLAESWLQRL GQTYGGEQPA AAPEFHPLLP
LHIALQQAAL DRIQLRSDDA VQRLACLVKR GQASGGMMLA VSALSQWLSL LLDEGKEGQA
AQLLPSLLEA AHGGVMQPMQ PLLEKHPQWL HEQLQAGAAC PVQAELLKHL PPVPIASTGN
GEALSGREMA VLELIAQGCS NQQISERLFI SLHTVKTHAS HINSKLGVER RTQAVAKAKS
LGLLA
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