More than 300 homologs were found in PanDaTox collection
for query gene P9303_28321 on replicon NC_008820
Organism: Prochlorococcus marinus str. MIT 9303



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008820  P9303_28321  putative regulatory protein  100 
 
 
231 aa  460  1e-129  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.270503 
 
 
-
 
NC_007516  Syncc9605_2514  Crp/FNR family transcriptional regulator  65.94 
 
 
231 aa  300  1e-80  Synechococcus sp. CC9605  Bacteria  normal  normal  0.619242 
 
 
-
 
NC_014248  Aazo_3421  Crp/Fnr family transcriptional regulator  39.52 
 
 
232 aa  160  2e-38  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3066  Crp/FNR family transcriptional regulator  38.1 
 
 
232 aa  155  4e-37  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1557  Crp/FNR family transcriptional regulator  38.94 
 
 
234 aa  155  5.0000000000000005e-37  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.986178 
 
 
-
 
NC_011884  Cyan7425_1533  transcriptional regulator, Crp/Fnr family  40.91 
 
 
231 aa  143  2e-33  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0916  transcriptional regulator, Crp/Fnr family  35.68 
 
 
235 aa  136  2e-31  Cyanothece sp. PCC 8802  Bacteria  normal  0.18169  normal 
 
 
-
 
NC_011726  PCC8801_0890  transcriptional regulator, Crp/Fnr family  35.68 
 
 
235 aa  136  2e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_2678  transcriptional regulator, Crp/Fnr family  36.57 
 
 
235 aa  132  5e-30  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007604  Synpcc7942_1243  cyclic nucleotide-binding domain-containing protein  36.45 
 
 
231 aa  122  4e-27  Synechococcus elongatus PCC 7942  Bacteria  hitchhiker  0.00145976  normal 
 
 
-
 
NC_007413  Ava_0144  cyclic nucleotide-binding domain-containing protein  31.43 
 
 
227 aa  114  1.0000000000000001e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  0.993696  normal 
 
 
-
 
NC_008312  Tery_1037  cyclic nucleotide-binding protein  30.41 
 
 
227 aa  114  1.0000000000000001e-24  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.272663 
 
 
-
 
NC_011729  PCC7424_4798  cyclic nucleotide-binding protein  33.16 
 
 
227 aa  114  1.0000000000000001e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014248  Aazo_3761  putative Crp/Fnr family transcriptional regulator  34.41 
 
 
227 aa  113  3e-24  'Nostoc azollae' 0708  Bacteria  normal  0.0509841  n/a   
 
 
-
 
NC_011884  Cyan7425_4893  cyclic nucleotide-binding protein  33.66 
 
 
237 aa  111  1.0000000000000001e-23  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8981  putative transcriptional regulator, Crp/Fnr family  36.7 
 
 
222 aa  99.8  3e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  31 
 
 
225 aa  94.4  2e-18  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2257  transcriptional regulator, Crp/Fnr family  32.87 
 
 
234 aa  88.6  8e-17  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000784359  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  31.98 
 
 
225 aa  87.8  1e-16  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  31.98 
 
 
225 aa  87.8  1e-16  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  29.27 
 
 
226 aa  86.7  3e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2635  cyclic nucleotide-binding protein  31.28 
 
 
228 aa  86.7  3e-16  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  29.65 
 
 
228 aa  85.5  6e-16  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_009972  Haur_0049  Crp/FNR family transcriptional regulator  29.55 
 
 
252 aa  85.5  7e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.422683  n/a   
 
 
-
 
NC_009953  Sare_1644  Crp/FNR family transcriptional regulator  32.24 
 
 
223 aa  85.1  9e-16  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1118  transcriptional regulator, Crp/Fnr family  32.16 
 
 
240 aa  84.7  0.000000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1659  cyclic nucleotide-binding  32.71 
 
 
223 aa  84.3  0.000000000000002  Salinispora tropica CNB-440  Bacteria  normal  0.834954  normal 
 
 
-
 
NC_009511  Swit_2706  Crp/FNR family transcriptional regulator  31.4 
 
 
228 aa  84  0.000000000000002  Sphingomonas wittichii RW1  Bacteria  normal  0.154877  normal 
 
 
-
 
NC_011666  Msil_3304  transcriptional regulator, Crp/Fnr family  31.05 
 
 
243 aa  84  0.000000000000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.010506 
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  28.57 
 
 
224 aa  83.6  0.000000000000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  31.67 
 
 
230 aa  83.6  0.000000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4417  transcriptional regulator, Crp/Fnr family  37.64 
 
 
258 aa  83.2  0.000000000000003  Variovorax paradoxus S110  Bacteria  normal  0.48784  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  30.69 
 
 
225 aa  82.8  0.000000000000004  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  31.65 
 
 
225 aa  82.4  0.000000000000006  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  32.87 
 
 
242 aa  82  0.000000000000007  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_013739  Cwoe_2918  transcriptional regulator, Crp/Fnr family  32.55 
 
 
226 aa  81.3  0.00000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.172063  normal  0.392966 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  30.37 
 
 
225 aa  81.3  0.00000000000001  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_013161  Cyan8802_3296  transcriptional regulator, Crp/Fnr family  30.22 
 
 
229 aa  81.3  0.00000000000001  Cyanothece sp. PCC 8802  Bacteria  normal  0.721133  normal  0.844961 
 
 
-
 
NC_011726  PCC8801_2804  cyclic nucleotide-binding protein  30.22 
 
 
229 aa  81.3  0.00000000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  30 
 
 
228 aa  80.5  0.00000000000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  28.72 
 
 
226 aa  80.9  0.00000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  27.09 
 
 
226 aa  80.5  0.00000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_007958  RPD_1005  cyclic nucleotide-binding  28.87 
 
 
226 aa  79.3  0.00000000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.184599  normal  0.14907 
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  28.71 
 
 
225 aa  79  0.00000000000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  30.85 
 
 
225 aa  78.6  0.00000000000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_2016  Crp/FNR family transcriptional regulator  31 
 
 
229 aa  78.6  0.00000000000009  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0776172  n/a   
 
 
-
 
NC_013093  Amir_5783  transcriptional regulator, Crp/Fnr family  31.58 
 
 
212 aa  78.6  0.00000000000009  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00268451  n/a   
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  30.7 
 
 
225 aa  78.2  0.00000000000009  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  31.91 
 
 
226 aa  77.8  0.0000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  33.33 
 
 
251 aa  78.2  0.0000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  29.03 
 
 
243 aa  77.8  0.0000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  29.55 
 
 
228 aa  77  0.0000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  29.24 
 
 
223 aa  76.3  0.0000000000003  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  30.32 
 
 
228 aa  76.6  0.0000000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  28.64 
 
 
226 aa  76.6  0.0000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  29.79 
 
 
226 aa  76.3  0.0000000000004  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  26.24 
 
 
219 aa  75.9  0.0000000000005  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_011666  Msil_3301  cyclic nucleotide-binding protein  31.52 
 
 
229 aa  75.9  0.0000000000006  Methylocella silvestris BL2  Bacteria  n/a    hitchhiker  0.00259627 
 
 
-
 
NC_013093  Amir_3957  transcriptional regulator, Crp/Fnr family  30.16 
 
 
289 aa  75.5  0.0000000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  29.47 
 
 
227 aa  75.5  0.0000000000007  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  31.19 
 
 
226 aa  75.5  0.0000000000007  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_013739  Cwoe_0602  transcriptional regulator, Crp/Fnr family  29.09 
 
 
225 aa  75.1  0.0000000000009  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.628877 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  30.99 
 
 
224 aa  74.7  0.000000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  31.22 
 
 
224 aa  74.3  0.000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  26.98 
 
 
231 aa  73.6  0.000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_012918  GM21_3198  transcriptional regulator, Crp/Fnr family  27.1 
 
 
221 aa  73.6  0.000000000003  Geobacter sp. M21  Bacteria  n/a    normal  0.90573 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  28.84 
 
 
220 aa  73.2  0.000000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_008025  Dgeo_0968  Crp/FNR family transcriptional regulator  31.55 
 
 
210 aa  72.8  0.000000000004  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.72963  normal  0.699928 
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  27.73 
 
 
222 aa  72.4  0.000000000005  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  30.1 
 
 
224 aa  72.4  0.000000000006  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1063  transcriptional regulator, Crp/Fnr family  27.57 
 
 
238 aa  72  0.000000000007  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  28.72 
 
 
225 aa  72  0.000000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1169  Crp/FNR family transcriptional regulator  29.27 
 
 
227 aa  72  0.000000000008  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0303416  normal  0.0506186 
 
 
-
 
NC_012857  Rpic12D_3781  transcriptional regulator, Crp/Fnr family  30.56 
 
 
230 aa  71.6  0.00000000001  Ralstonia pickettii 12D  Bacteria  normal  0.505907  normal 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  28.18 
 
 
243 aa  71.6  0.00000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  28.3 
 
 
220 aa  71.6  0.00000000001  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  31.21 
 
 
225 aa  71.6  0.00000000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_011894  Mnod_6767  cyclic nucleotide-binding protein  29.38 
 
 
228 aa  71.6  0.00000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.171014  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  29.41 
 
 
226 aa  71.2  0.00000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_010678  Rpic_4858  transcriptional regulator, Crp/Fnr family  30.56 
 
 
230 aa  71.6  0.00000000001  Ralstonia pickettii 12J  Bacteria  normal  normal  0.748285 
 
 
-
 
NC_010511  M446_6568  cyclic nucleotide-binding protein  28.81 
 
 
228 aa  71.2  0.00000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.538415  normal  0.0410288 
 
 
-
 
NC_007908  Rfer_3511  Crp/FNR family transcriptional regulator  25.38 
 
 
233 aa  70.9  0.00000000002  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  30.85 
 
 
225 aa  69.7  0.00000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_010002  Daci_5739  cyclic nucleotide-binding protein  33.74 
 
 
235 aa  70.1  0.00000000003  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.172184 
 
 
-
 
NC_011830  Dhaf_3071  transcriptional regulator, Crp/Fnr family  28 
 
 
224 aa  68.9  0.00000000005  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00222127  n/a   
 
 
-
 
NC_008609  Ppro_1835  Crp/FNR family transcriptional regulator  25.49 
 
 
250 aa  69.3  0.00000000005  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0256984  n/a   
 
 
-
 
NC_012918  GM21_2448  transcriptional regulator, Crp/Fnr family  25.12 
 
 
238 aa  68.9  0.00000000006  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  29.38 
 
 
225 aa  68.9  0.00000000006  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_008044  TM1040_1951  Crp/FNR family transcriptional regulator  28.87 
 
 
222 aa  68.6  0.00000000007  Ruegeria sp. TM1040  Bacteria  normal  0.861655  normal  0.0267012 
 
 
-
 
NC_008781  Pnap_3212  CRP/FNR family transcriptional regulator  27.05 
 
 
229 aa  68.6  0.00000000008  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0543887  normal 
 
 
-
 
NC_010725  Mpop_4711  cyclic nucleotide-binding protein  28.25 
 
 
230 aa  67.8  0.0000000001  Methylobacterium populi BJ001  Bacteria  normal  0.754309  decreased coverage  0.00295307 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  28.19 
 
 
224 aa  68.2  0.0000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_008709  Ping_0388  cAMP-regulatory protein  25.58 
 
 
212 aa  67.8  0.0000000001  Psychromonas ingrahamii 37  Bacteria  normal  0.0189183  normal 
 
 
-
 
NC_009253  Dred_3227  CRP/FNR family transcriptional regulator  23.68 
 
 
232 aa  68.2  0.0000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1802  transcriptional regulator, Crp/Fnr family  24.26 
 
 
238 aa  67.4  0.0000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_4286  Crp/FNR family transcriptional regulator  32.75 
 
 
241 aa  67.4  0.0000000002  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2874  cyclic nucleotide-binding protein  28.49 
 
 
228 aa  67.4  0.0000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.191735 
 
 
-
 
NC_002939  GSU1992  Crp/FNR family transcriptional regulator  29.65 
 
 
226 aa  66.6  0.0000000003  Geobacter sulfurreducens PCA  Bacteria  normal  0.103472  n/a   
 
 
-
 
NC_013131  Caci_7216  transcriptional regulator, Crp/Fnr family  30.99 
 
 
246 aa  66.6  0.0000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.726682  normal 
 
 
-
 
NC_009921  Franean1_0328  Crp/FNR family transcriptional regulator  31.25 
 
 
246 aa  66.2  0.0000000004  Frankia sp. EAN1pec  Bacteria  normal  0.0277272  normal  0.0570772 
 
 
-
 
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