Gene Ping_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0388 
Symbol 
ID4624194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp494356 
End bp494994 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content38% 
IMG OID639795584 
ProductcAMP-regulatory protein 
Protein accessionYP_941848 
Protein GI119944168 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0189183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAATAA CCAAACCTCA AACCGATCCA ACGTTGGAGT GGTTTTTATC ACACTGTCAC 
ACACATAAAT ATCCAGCTAA AAGTATACTT ATTCATGCTG GAGAAAAGGC TGATACACTT
TATTTCATCG TTAAAGGCTC GGTTGCAGTT GTGATTAAGG ATGAAGAAGG TAAAGAAATG
ATTTTATCTT ACTTAAATCA AGGTGATTTT ATTGGTGAAT TAGGTTTATT TGATAAACAA
GAAAATCCAA TTCGCAGTGC TTCAATTAAG GCAAAAACTC CCTGTGAAGT TGCTGAAATT
TCTTATAAGA AGTTCAATCA ACTGATCACT GTCAATCCTG AAATTTTAAT GCGTTTATCA
AAGCAAATGG CTGATCGTTT ACAGATTACA AGCCAAAAAG TGGGTAACCT TGCATTTTTG
GATGTCACAG GCCGTATCGC AAATACACTG CTGGATCTTG CCAAGCAGCC GGACGCAATG
ACCCACCCCG ATGGCATGCA AATCAAAATC ACTCGTCAAG AAATAGGTCA GATTGTCGGT
TGTTCACGTG AAACTGTTGG TCGAATCCTT AAAATGCTTG AGGAACAAGG TCTTATTTCT
GCTCACGGTA AAACAATTGT GGTATTCGGG ACGCGCTAA
 
Protein sequence
MIITKPQTDP TLEWFLSHCH THKYPAKSIL IHAGEKADTL YFIVKGSVAV VIKDEEGKEM 
ILSYLNQGDF IGELGLFDKQ ENPIRSASIK AKTPCEVAEI SYKKFNQLIT VNPEILMRLS
KQMADRLQIT SQKVGNLAFL DVTGRIANTL LDLAKQPDAM THPDGMQIKI TRQEIGQIVG
CSRETVGRIL KMLEEQGLIS AHGKTIVVFG TR