Gene Caci_7216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7216 
Symbol 
ID8338584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8384264 
End bp8385004 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content68% 
IMG OID644960297 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_003117886 
Protein GI256396322 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.726682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCATC TGGACCGCTC GGGCCCGGAT CCCCTGCGAA GAGCACAGCG CTCTGCCGCG 
CGCGGTACTT GGCGCTGGCC GGAGAACAGC CTTTTGGGAA GTCTGCCGGA AGCCACGCGC
GAGCGATTCC TGAAGCTGGG CAAGATGGTG CAGCGGCAGC CGGGGACCGT CCTGATCCGC
GAGGAGGACC AGTCGACCTC CGTGCTGATC CTGCTCGACG GCGTCGTGAA GGTCACCGGC
CGCACGCAGG ACCAGCGCGA GGCGCTGCTG GCGGTGCGCG TCGGCGGCGA CCTCGTCGGC
GAGTTCGGCG CCCTGGACGG CAAACCGCGC TCGGCGACCG TCACCACCTG CGGCACGCTG
GTGCTCCGCC TGGTCACCCG CACGGACTTC CTCGCCGCGC TCAACGCCGA TGCCGTGCTG
TCCCAAGCGG TCAGCCGCTC CGTCGTGGAC AAGCTGCGCG TCGCCAACAG CCGCCGCATC
GACTTCGCCG GCAGCAACGC GCCGACCCGG CTGGCCCGCG TCATCTACGA CTTGGCGATG
ACCTACGGCG AGCGCGAGGG CACGACCCTC GTCATCCGCT GGCCGCTCAC CCAACCAGAG
ATCGCCTCCC TCGTCGGCGC GGCCGAACCC ACGGTTTTCA AGGCGCTCAA ACAGTTGCGG
GAAGCTGGCA TTGTCAACAA CGGTTATCGC CGCATCGCAG TACGCGATAT CGACAAGCTG
CGCGCTGTGG CGTTTCCGTA A
 
Protein sequence
MDHLDRSGPD PLRRAQRSAA RGTWRWPENS LLGSLPEATR ERFLKLGKMV QRQPGTVLIR 
EEDQSTSVLI LLDGVVKVTG RTQDQREALL AVRVGGDLVG EFGALDGKPR SATVTTCGTL
VLRLVTRTDF LAALNADAVL SQAVSRSVVD KLRVANSRRI DFAGSNAPTR LARVIYDLAM
TYGEREGTTL VIRWPLTQPE IASLVGAAEP TVFKALKQLR EAGIVNNGYR RIAVRDIDKL
RAVAFP