| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4417 |
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| Symbol | |
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| ID | 7974091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4656931 |
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| End bp | 4657707 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795006 |
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| Product | transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_002946294 |
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| Protein GI | 239817384 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.48784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGGCT TCGAAGGGCA CCCGAGCATA ATGCGCGCGC CCCTCTTCAT CGGCATGGCC
CTCACTCCAG ACATTCCCCG TTCCAGCCTC GCGCTGCGCC GCATCGCGCT GTTCGAAGGC
TTGCCAGACC AGCGGCTCGA CCTGCTCGCG CAGCAATGCC TGTGGCACAG CGTCGAGGCC
GGCAAACCCC TGCTGCTGCG CGCCGAACAG CAGCAGGGCG AGGTGTTCCT GCTGGTCTCG
GGCCGGGTCC GCGTGACCAC CTATGCGGCC AACGGGCGGC AGGTGACCTT CAGGGATTCG
GAGGCCGGCG AGCATTTCGG CGACATTGCC GCCATCGACG GCGGGCCGCG TTCGGCCGAC
GTGGTCACGC TGCTGCCGAG CGTGCTGGCC AGCCTCGACC GCGCCGCCTT CCTGAGCCTG
TTGCGCGAGG AGCCGCTGGT GGCCGAGCGC GTGATGCAGC GGCTGGCGTC ATTGGTGCGC
CAGCTGTCGG AGCGCGTGAT CGACCTGAGC ACGCTGGGGG TCCAGAACCG GCTGCATGCC
GAGCTGCTGC GCCTTGCGCG GGCCGCGGGC GTGGCGCACA ACCAGGCCCG GCTGGAGCCG
GCGCCCAGGC ACGCGGCGCT CGCGAGCCAG ATCAGCACCA ACCGCGAGCA GGTGACCCGC
GAGCTCAACG TGCTGGCGCG CAGCGGCGTG CTTCAGAAGG ACGGCAAGGC TTTGCGGGTG
GCCGACGTCG CCCGGCTCGA GGCGATGGTC TCGCAGGTCA GGGGCGACGC CGGCTGA
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| Protein sequence | MNGFEGHPSI MRAPLFIGMA LTPDIPRSSL ALRRIALFEG LPDQRLDLLA QQCLWHSVEA
GKPLLLRAEQ QQGEVFLLVS GRVRVTTYAA NGRQVTFRDS EAGEHFGDIA AIDGGPRSAD
VVTLLPSVLA SLDRAAFLSL LREEPLVAER VMQRLASLVR QLSERVIDLS TLGVQNRLHA
ELLRLARAAG VAHNQARLEP APRHAALASQ ISTNREQVTR ELNVLARSGV LQKDGKALRV
ADVARLEAMV SQVRGDAG
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