| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6568 |
|---|
| Symbol | |
|---|
| ID | 6134399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 7223121 |
|---|
| End bp | 7223807 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641646657 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_001773258 |
|---|
| Protein GI | 170744603 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.538415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0410288 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCGTC TGGGGGTATT TCCGTTCTTC AAGGACGCGG GGGTCGACCT CGCCCCCTAC
GAGACCCGCT GCATCTGGAG ACGCTTCGAG CCGAACGAGG TCCTGGTGGA CTTCGACGAC
GCCTCGACGG ACGTGTATTT CCTGGCCGCG GGCGAGGTGC GCATCCTCAA CCGCACGCAA
TCGGGCAAGG AGGTGATCCT CGGGGAGATG CGCGGCGGCG AGTTCTTCGG GGAACTCGCG
GCGATCGACG GGGTGAGCCG CTCGGCCAAC GTCACGGCGC TGACGCGCGG CGAACTCTGC
GTCGTGCCGG CGCCGGTCTT CCGCCAGATC GTCTTCGCGC CGCCGCCGAT CGGGGACCGC
CTGCTGCGCC TCCTCGCCAA GCGGGTGCGC TCGCTCAACG GCCGCCTGAT GGAGCACGCG
GTCCTCGACC TGCGCCACCG GCTCTACGCG GAGCTGCTGC GGCTCTCCTC GCCGCGGGCG
GGCTCGGACG GCGAGCGGGT CGTGACCCCG CCGCCCTACC ACCACGTGCT CGCCGCCCGG
ATCGGCTGCC GCCGCGAGCA GGTGACGCGG GAATTCACCG TGATGGCCCA GGAGGGCCTC
GTGGACCGCA CCCGCGGCGC CCTGATCCTG CGCCGGCCCG ACCTGCTGGA AGCCCGGGTC
GCCGAGGCGC TGCGGGAGGA CGGCTGA
|
|---|
| Protein sequence | MGRLGVFPFF KDAGVDLAPY ETRCIWRRFE PNEVLVDFDD ASTDVYFLAA GEVRILNRTQ
SGKEVILGEM RGGEFFGELA AIDGVSRSAN VTALTRGELC VVPAPVFRQI VFAPPPIGDR
LLRLLAKRVR SLNGRLMEHA VLDLRHRLYA ELLRLSSPRA GSDGERVVTP PPYHHVLAAR
IGCRREQVTR EFTVMAQEGL VDRTRGALIL RRPDLLEARV AEALREDG
|
|---|
| |