More than 300 homologs were found in PanDaTox collection
for query gene Xcel_0734 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013530  Xcel_0734  putative two component transcriptional regulator, winged helix family  100 
 
 		 288 aa  556  1e-157  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.150105  n/a   
 
 
-
 
NC_012803  Mlut_03350  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  39.05 
 
 		 262 aa  104  2e-21  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_0805  putative two component transcriptional regulator, winged helix family  34.45 
 
 		 288 aa  102  9e-21  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008541  Arth_0657  response regulator receiver protein  34.39 
 
 		 290 aa  92.4  7e-18  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_007514  Cag_0435  two component transcriptional regulator  27.94 
 
 		 253 aa  62.4  0.000000009  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.583358  n/a   
 
 
-
 
NC_011886  Achl_2869  two component transcriptional regulator, winged helix family  36.94 
 
 		 232 aa  61.6  0.00000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013172  Bfae_03260  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  37.17 
 
 		 251 aa  61.2  0.00000002  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_013223  Dret_0467  two component transcriptional regulator, winged helix family  33.06 
 
 		 230 aa  60.5  0.00000003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  36.36 
 
 		 227 aa  60.1  0.00000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal  1 
 
 
-
 
NC_013203  Apar_1044  two component transcriptional regulator, winged helix family  33.33 
 
 		 234 aa  58.9  0.00000009  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  34.75 
 
 		 239 aa  57.8  0.0000002  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  31.85 
 
 		 239 aa  57.8  0.0000002  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_009012  Cthe_1600  two component transcriptional regulator  32.35 
 
 		 224 aa  58.2  0.0000002  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000237714  n/a   
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  33.93 
 
 		 230 aa  57.4  0.0000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  30.09 
 
 		 226 aa  56.6  0.0000005  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  33.64 
 
 		 229 aa  56.6  0.0000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_008541  Arth_0724  two component transcriptional regulator  29.82 
 
 		 226 aa  56.6  0.0000005  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_3441  putative two component transcriptional regulator, winged helix family  33.33 
 
 		 247 aa  56.2  0.0000007  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009943  Dole_1930  two component transcriptional regulator  27.73 
 
 		 233 aa  55.1  0.000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.465475  n/a   
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  32.14 
 
 		 226 aa  55.1  0.000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010655  Amuc_1110  two component transcriptional regulator, winged helix family  33.33 
 
 		 234 aa  54.3  0.000002  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  34.23 
 
 		 243 aa  54.3  0.000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_0439  putative two component transcriptional regulator, winged helix family  31.37 
 
 		 248 aa  54.3  0.000002  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.190602 
 
 
-
 
NC_010571  Oter_2550  two component transcriptional regulator  33.33 
 
 		 228 aa  54.3  0.000002  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0605198 
 
 
-
 
NC_013170  Ccur_00280  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  30.33 
 
 		 234 aa  54.7  0.000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  hitchhiker  0.0000064956 
 
 
-
 
NC_013173  Dbac_2662  two component transcriptional regulator, winged helix family  33.33 
 
 		 231 aa  54.7  0.000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_0850  two component transcriptional regulator, winged helix family  30.97 
 
 		 226 aa  54.3  0.000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_010524  Lcho_2529  two component transcriptional regulator  33.33 
 
 		 232 aa  54.3  0.000002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00604151 
 
 
-
 
NC_008789  Hhal_1320  response regulator receiver protein  37.84 
 
 		 160 aa  54.3  0.000002  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_2789  winged helix family two component transcriptional regulator  30.33 
 
 		 256 aa  53.9  0.000003  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_1263  two component transcriptional regulator  30.33 
 
 		 256 aa  53.9  0.000003  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  31.11 
 
 		 239 aa  53.9  0.000003  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_013517  Sterm_0289  two component transcriptional regulator, winged helix family  26.89 
 
 		 232 aa  53.9  0.000003  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.0000126796  n/a   
 
 
-
 
NC_011126  HY04AAS1_1268  two component transcriptional regulator, winged helix family  23.64 
 
 		 229 aa  53.9  0.000003  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  31.11 
 
 		 239 aa  53.9  0.000003  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  34.23 
 
 		 249 aa  53.9  0.000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal  1 
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  34.23 
 
 		 241 aa  53.1  0.000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.0000121276 
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  28.26 
 
 		 232 aa  53.1  0.000005  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_013161  Cyan8802_2736  two component transcriptional regulator, winged helix family  32.14 
 
 		 257 aa  53.1  0.000005  Cyanothece sp. PCC 8802  Bacteria  hitchhiker  0.00867541  hitchhiker  0.0000000494299 
 
 
-
 
NC_011726  PCC8801_3375  two component transcriptional regulator, winged helix family  32.14 
 
 		 257 aa  53.1  0.000005  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  31.36 
 
 		 229 aa  53.1  0.000006  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  0.258551 
 
 
-
 
NC_010001  Cphy_2827  two component transcriptional regulator  28.12 
 
 		 230 aa  52.8  0.000007  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_3694  response regulator receiver protein  35.38 
 
 		 254 aa  52.4  0.000008  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_2231  two component transcriptional regulator, winged helix family  30.25 
 
 		 226 aa  52.4  0.000009  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011661  Dtur_0154  two component transcriptional regulator, winged helix family  27.78 
 
 		 220 aa  52.4  0.000009  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.443854  n/a   
 
 
-
 
NC_003296  RS03101  two-component response regulator transcription regulator protein  33.08 
 
 		 226 aa  52  0.00001  Ralstonia solanacearum GMI1000  Bacteria  normal  0.473925  normal  1 
 
 
-
 
NC_009455  DehaBAV1_0937  two component transcriptional regulator  27.87 
 
 		 227 aa  51.6  0.00001  Dehalococcoides sp. BAV1  Bacteria  normal  0.834094  n/a   
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  31.53 
 
 		 255 aa  52  0.00001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_4891  two component transcriptional regulator, winged helix family  33.33 
 
 		 249 aa  52  0.00001  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_3737  two component transcriptional regulator  31.54 
 
 		 231 aa  51.6  0.00001  Roseiflexus sp. RS-1  Bacteria  normal  1  hitchhiker  0.00273603 
 
 
-
 
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  34.26 
 
 		 240 aa  52  0.00001  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013517  Sterm_1086  two component transcriptional regulator, winged helix family  26.73 
 
 		 221 aa  50.8  0.00002  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_010803  Clim_0772  two component transcriptional regulator, winged helix family  28.83 
 
 		 233 aa  51.2  0.00002  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_010816  BLD_1194  putative response regulator  31.48 
 
 		 266 aa  51.2  0.00002  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  27.82 
 
 		 226 aa  51.2  0.00002  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_007492  Pfl01_3379  two component heavy metal response transcriptional regulator  32.48 
 
 		 223 aa  51.6  0.00002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007512  Plut_0632  two component transcriptional regulator  30.09 
 
 		 236 aa  51.6  0.00002  Chlorobium luteolum DSM 273  Bacteria  normal  0.883969  normal  1 
 
 
-
 
NC_007604  Synpcc7942_2466  two component transcriptional regulator  34.55 
 
 		 235 aa  50.8  0.00002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.28267  hitchhiker  0.0000000000126243 
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  29.46 
 
 		 236 aa  51.6  0.00002  Magnetococcus sp. MC-1  Bacteria  normal  1  decreased coverage  0.00391258 
 
 
-
 
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  32.43 
 
 		 251 aa  50.8  0.00002  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_010831  Cphamn1_1694  two component transcriptional regulator, winged helix family  27.43 
 
 		 236 aa  50.8  0.00002  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  decreased coverage  0.0000906935 
 
 
-
 
NC_013216  Dtox_2915  two component transcriptional regulator, winged helix family  27.27 
 
 		 225 aa  51.6  0.00002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.892207  normal  0.300351 
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  30.17 
 
 		 229 aa  50.8  0.00003  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011729  PCC7424_4398  two component transcriptional regulator, winged helix family  28.93 
 
 		 263 aa  50.4  0.00003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.184239 
 
 
-
 
NC_010320  Teth514_2216  two component transcriptional regulator  25.45 
 
 		 224 aa  50.4  0.00003  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_04480  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  27.65 
 
 		 232 aa  50.4  0.00003  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.226813 
 
 
-
 
NC_009767  Rcas_4351  two component transcriptional regulator  35.34 
 
 		 245 aa  50.8  0.00003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.110039  normal  1 
 
 
-
 
NC_013173  Dbac_2095  two component transcriptional regulator, winged helix family  33.98 
 
 		 229 aa  50.4  0.00003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_3002  two component transcriptional regulator  33.86 
 
 		 230 aa  50.4  0.00003  Acidovorax citrulli AAC00-1  Bacteria  normal  0.67465  normal  0.369251 
 
 
-
 
NC_009523  RoseRS_0188  two component transcriptional regulator  34.19 
 
 		 245 aa  50.1  0.00004  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00347389  normal  0.0545477 
 
 
-
 
NC_013595  Sros_0895  response regulator receiver protein  31.75 
 
 		 237 aa  50.1  0.00004  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2737  transcriptional regulatory protein  31.53 
 
 		 253 aa  50.4  0.00004  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  31.62 
 
 		 238 aa  50.1  0.00004  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  33.98 
 
 		 236 aa  50.1  0.00004  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  unclonable  0.0000000182155 
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  33.33 
 
 		 228 aa  50.1  0.00004  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008639  Cpha266_0880  two component transcriptional regulator  25.56 
 
 		 236 aa  50.4  0.00004  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  30.36 
 
 		 225 aa  50.4  0.00004  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_2563  two component transcriptional regulator, winged helix family  27.23 
 
 		 230 aa  49.7  0.00005  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_1955  two component transcriptional regulator, winged helix family  27.82 
 
 		 236 aa  49.7  0.00005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.295041  normal  1 
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  30.91 
 
 		 227 aa  50.1  0.00005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.0239565 
 
 
-
 
NC_013124  Afer_0241  putative two component transcriptional regulator, winged helix family  32.11 
 
 		 217 aa  49.7  0.00005  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_0187  two component transcriptional regulator  36.84 
 
 		 227 aa  49.7  0.00006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008527  LACR_1090  DNA-binding response regulator  28.57 
 
 		 228 aa  49.7  0.00006  Lactococcus lactis subsp. cremoris SK11  Bacteria  decreased coverage  0.00019826  n/a   
 
 
-
 
NC_013721  HMPREF0424_0189  transcriptional regulatory protein, C-terminal domain protein  33.03 
 
 		 296 aa  49.3  0.00007  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_008541  Arth_3656  two component transcriptional regulator  37.86 
 
 		 275 aa  49.3  0.00007  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_2969  two component transcriptional regulator, winged helix family  31.53 
 
 		 246 aa  49.3  0.00008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_0614  putative two component transcriptional regulator, winged helix family  32.12 
 
 		 265 aa  49.3  0.00008  Rhodothermus marinus DSM 4252  Bacteria  normal  0.265471  n/a   
 
 
-
 
NC_011060  Ppha_1701  two component transcriptional regulator, winged helix family  26.32 
 
 		 236 aa  49.3  0.00008  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_0246  two component transcriptional regulator, winged helix family  29.36 
 
 		 225 aa  49.3  0.00008  Clostridium cellulolyticum H10  Bacteria  normal  0.0272164  n/a   
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  30.36 
 
 		 226 aa  49.3  0.00008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  29.73 
 
 		 236 aa  49.3  0.00008  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_011205  SeD_A1171  transcriptional regulatory protein YedW  29.73 
 
 		 226 aa  48.9  0.00009  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_1402  two component transcriptional regulator, winged helix family  33.03 
 
 		 241 aa  48.9  0.00009  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.154165 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  28.68 
 
 		 229 aa  48.9  0.00009  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2781  two component transcriptional regulator  32.46 
 
 		 241 aa  48.9  0.00009  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  28 
 
 		 225 aa  48.5  0.0001  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  29.2 
 
 		 229 aa  48.5  0.0001  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  29.84 
 
 		 225 aa  48.5  0.0001  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008321  Shewmr4_3006  two component transcriptional regulator  29.13 
 
 		 237 aa  48.5  0.0001  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00000324706  normal  0.0671955 
 
 
-
 
NC_008322  Shewmr7_3087  two component transcriptional regulator  29.13 
 
 		 237 aa  48.5  0.0001  Shewanella sp. MR-7  Bacteria  unclonable  0.00000126315  normal  0.467683 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>