| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1044 |
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| Symbol | |
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| ID | 8413917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1180510 |
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| End bp | 1181214 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022633 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003180063 |
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| Protein GI | 257784846 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAAGG TTCTTATCGT TGAAGACGAA GAAAAAATTG CACGCTTTAT AGAACTCGAA
CTTAAACACG AGGGCTATGA AGTAGACAAA GCTCTTGACG GAAGAACCGG CGCTGAGAAA
GCGCTGACAA ATGACTACGA CCTTATCTTA CTTGATATAC TTCTTCCCCA ACTTAATGGT
CTAGAAGTTC TTAGAAGGAT TCGTCGCGAG AAAAACACGC CAACTATCAT GCTTACTGCT
CGTGATTCAG TTATGGATAA AGTTGCTGGT CTTGATGCGG GCGCAGATGA CTATCTCACC
AAGCCTTTTG CGATTGAAGA ACTTCTCGCC CGCATTCGAG TGGCGCTCAA GCATCACGAG
GTGGACAGCA CAAGCTCACA GATTCCCTCC AACGTTCCAA CAAAAAACGT TTTTACAATT
AAGGGTGTCT CTCTTGATGT AGACCGTAGA GAAGTCTGCG TCAATAACAA TTCGATTGAG
TTGACAACTA AAGAATTTGA AGTGCTTCGC ATGCTTATGG AACACGCTGG TGTTGTCTTG
AGTCGGGAAC GCATTGCATC AGAAGCTCTC GGGTATGAGT TTGCGGGAGA AACTAATAAC
GTAGATGTCC ACATTGCTCA TCTACGCGCA AAAATTGACG ATCAATATAA TATCAAGCTA
ATTACTACTG TACGTGGAGT TGGGTATGTC ATCAGAGAAA TCTAA
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| Protein sequence | MIKVLIVEDE EKIARFIELE LKHEGYEVDK ALDGRTGAEK ALTNDYDLIL LDILLPQLNG
LEVLRRIRRE KNTPTIMLTA RDSVMDKVAG LDAGADDYLT KPFAIEELLA RIRVALKHHE
VDSTSSQIPS NVPTKNVFTI KGVSLDVDRR EVCVNNNSIE LTTKEFEVLR MLMEHAGVVL
SRERIASEAL GYEFAGETNN VDVHIAHLRA KIDDQYNIKL ITTVRGVGYV IREI
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