| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2466 |
|---|
| Symbol | |
|---|
| ID | 3774486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 2546850 |
|---|
| End bp | 2547557 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637800915 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_401483 |
|---|
| Protein GI | 81301275 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.28267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000000000126243 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACGACCG CGATCGTCCA TGTCATCGAA GGCAATCCCC AACTGCGATC GCTCCTGCGC
TGGCACCTGA GCCAATTAGG GTTGGAAGTG GGGCTAGCGG CAGGGTTGAG TGAAGCGCGG
CAACTGCTGC GATCGCAATG TCCTAGCTTG ATTGTCTTGG CGATCGACCT ACCCGATGGT
AGCGGTCTAG AATACTGTCG CTGGCTGCAA GCTCAGGACT TGGCGGCATT GATTTTAATG
ATTTCGGCGC GATCGAGCGA AGCCGATGTA GTGGCTGGGC TGCAAGCGGG CGCTGATGAC
TACCTGAAAA AGCCCTTTGG CCTGCAAGAG TTTCTGGCTC GGGTTCAAGC CCTATTGCGT
CGTCAGCGAC CCCAACCGCT GAGCCGCCTT GAATTTGGAG ATTTGGTCGT TGACCTCGTG
CAGCGGCGAG TGGAACATCA CGGCCGCGCG ATCGATTTGA CGCCCCAGGA GTTCAGCTTG
CTTTACGTTT TGGTGCAAGC CCAAGGACAA CCCTTGAGTC GCTCCGATCT GTTGCAGCGG
GCTTGGCCGA ATGCGATCGA TAACCCGCGC ACCGTGGATA CGCACATCCT GTCGCTGCGC
AAGAAACTGG AACAGAACCC GCAGGCGCCA CAACTTTTGC AAACCGTGCG CAACGTCGGC
TATCGCTTTA CGCCCGAGGC AATGGCCACC CGTTTGGCGG TCTCTTAG
|
|---|
| Protein sequence | MTTAIVHVIE GNPQLRSLLR WHLSQLGLEV GLAAGLSEAR QLLRSQCPSL IVLAIDLPDG
SGLEYCRWLQ AQDLAALILM ISARSSEADV VAGLQAGADD YLKKPFGLQE FLARVQALLR
RQRPQPLSRL EFGDLVVDLV QRRVEHHGRA IDLTPQEFSL LYVLVQAQGQ PLSRSDLLQR
AWPNAIDNPR TVDTHILSLR KKLEQNPQAP QLLQTVRNVG YRFTPEAMAT RLAVS
|
|---|
| |