Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3006 |
Symbol | |
ID | 4253577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3592874 |
End bp | 3593587 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119648 |
Product | two component transcriptional regulator |
Protein accession | YP_735134 |
Protein GI | 113971341 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000324706 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0671955 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAATC CACAATCACC CCACAGAGTG TTATTGGTTG AAGACGATGT CCGTCTTGCG AATTTAATCG TAGATTATTT GAAATCCCAC GGCATGCATG TTGAAGTCGA GCGCCGTGGT GACACTGTCC TAACCCGCTT AATCAACTAC AAGCCAGATA TCATACTGCT AGACATTATG TTGCCAGGTA TCGATGGCCT GAGCCTATGT GAAAAGCTAC CCGATTACTT TGCTGGCCCC ATCCTACTGA TGAGCGCTCT AGGTTCGAGC GAAGATCAGA TCAAAGGTTT AGAGCTCGGT GCCGACGACT ATGTCGTTAA ACCCGTTGAC CCAGCGCTGC TCGTCGCCCG TATAAACAAC CTATTACGTC GCCAAAATCA ACCGCCTCAG GCCGAATCCC ATTGTCTGAC CTTTGGTAAG CTGAGTATCG ATCCCCATAC CCATGCAATC CGCCTCGACA ATAAAGAAGT CGACCTCACC AGCCATGAGT TTGAACTCCT CTGGTTACTG GCCTCACAGG CAGGACAAGT GCTGAGCCGT CAGTACATCT ATCAATTACT GCTTAACATT GATTTTGATG GTAAAGATAG AAAGATAGAC GTGCGCATTT CAAGGCTACG TAAAAAGCTG AATGACAATA TCGAGACCCC CTTCAGAATT AAAACCGTCT GGGGGCAGGG TTATCTCTTC GCCCCAGAGG CTTGGAACAA CTAA
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Protein sequence | MTNPQSPHRV LLVEDDVRLA NLIVDYLKSH GMHVEVERRG DTVLTRLINY KPDIILLDIM LPGIDGLSLC EKLPDYFAGP ILLMSALGSS EDQIKGLELG ADDYVVKPVD PALLVARINN LLRRQNQPPQ AESHCLTFGK LSIDPHTHAI RLDNKEVDLT SHEFELLWLL ASQAGQVLSR QYIYQLLLNI DFDGKDRKID VRISRLRKKL NDNIETPFRI KTVWGQGYLF APEAWNN
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