| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0188 |
|---|
| Symbol | |
|---|
| ID | 5207123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 234812 |
|---|
| End bp | 235549 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640593818 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001274574 |
|---|
| Protein GI | 148654369 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00347389 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0545477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAA TACTCCTGGT CGAAGACGAT AGCGTTCTTC TCGAGACGCT TTCGTACAAT
TTTGAGCGGG CAGGGTTTCA GGTCGCAACC GCCTCGGATG GTTTGACCGG GCTGGAAATG
GCGCGTCGGA CGCATCCCGA TCTGATCATC CTGGATGTGA TGCTGCCGGG ACTGGATGGT
TTTTCCGTCT GTCGCGCAGT GGCGAAAGAA ACAACCGTTC CGATTGTTCT GCTGACGGCG
CTGCACGACG AGGCGCACCG GATCGCCGGG CTGGAACTCG GCGCAATCGA TTACGTGGTC
AAGCCGTTCA GTATGGGTGA GTTGCTGGCG CGTGTACGCG CCATCCTGCG CTGGAATGAA
CGCCAGCGCC AAACCCCATC CTCGAATGTG CTATGCGTTG GTCCGGTGCA ACTGGATCGC
AACAGCCGAC GCGTCTGGTA CAAGGACCGC GAGATCGAAC TCTCGCACAA AGAGTTCGAT
CTGCTCGCGT GCCTGATGCA CAACGCCGGT GTCGCGCTTT CGCGCGACCT GTTGCTGGAG
CGTGTCTGGG GCAGCGATTT TCTCGGTTCG AACCGGACAA TCGATGTTCA CGTGCGCTGG
CTGCGCGAAA AACTGGAGCC TGATCCCGCC AATCCAACGC TGATCCGCAC CGTGCGCGGC
ATCGGGTACT GCTTTCAGGA CCCGGCAACA GACCCGCCAG GGCGTCGCAT GCTGGAGGAG
TCGGAGCCAG CATCCTGA
|
|---|
| Protein sequence | MTTILLVEDD SVLLETLSYN FERAGFQVAT ASDGLTGLEM ARRTHPDLII LDVMLPGLDG
FSVCRAVAKE TTVPIVLLTA LHDEAHRIAG LELGAIDYVV KPFSMGELLA RVRAILRWNE
RQRQTPSSNV LCVGPVQLDR NSRRVWYKDR EIELSHKEFD LLACLMHNAG VALSRDLLLE
RVWGSDFLGS NRTIDVHVRW LREKLEPDPA NPTLIRTVRG IGYCFQDPAT DPPGRRMLEE
SEPAS
|
|---|
| |