More than 300 homologs were found in PanDaTox collection
for query gene Sked_04930 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  100 
 
 		 249 aa  493  9.999999999999999e-139  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal  1 
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  83.84 
 
 		 241 aa  392  1e-108  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.0000121276 
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  84.96 
 
 		 243 aa  386  1e-106  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_0439  putative two component transcriptional regulator, winged helix family  79.22 
 
 		 248 aa  382  1e-105  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.190602 
 
 
-
 
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  80 
 
 		 240 aa  371  1e-102  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0895  response regulator receiver protein  69.13 
 
 		 237 aa  318  6e-86  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_0595  putative two component transcriptional regulator, winged helix family  72.07 
 
 		 237 aa  312  3.9999999999999997e-84  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_2025  response regulator receiver protein  65.74 
 
 		 261 aa  310  2e-83  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  64.34 
 
 		 251 aa  309  2.9999999999999997e-83  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  67.26 
 
 		 259 aa  300  2e-80  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_009921  Franean1_6176  winged helix family two component response transcriptional regulator  68.16 
 
 		 247 aa  297  1e-79  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.186762 
 
 
-
 
NC_007777  Francci3_0443  response regulator receiver protein  67.71 
 
 		 250 aa  296  3e-79  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010816  BLD_1194  putative response regulator  61.28 
 
 		 266 aa  292  4e-78  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  63.64 
 
 		 232 aa  290  1e-77  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  64.09 
 
 		 232 aa  290  2e-77  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_013131  Caci_8253  putative two component transcriptional regulator, winged helix family  68.69 
 
 		 264 aa  288  5.0000000000000004e-77  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2737  transcriptional regulatory protein  63.01 
 
 		 253 aa  286  1e-76  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_4240  transcriptional regulator domain-containing protein  61.6 
 
 		 257 aa  287  1e-76  Nocardioides sp. JS614  Bacteria  normal  0.466466  n/a   
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  62.76 
 
 		 255 aa  275  6e-73  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_6823  putative two component transcriptional regulator, winged helix family  65.33 
 
 		 250 aa  272  3e-72  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_4646  putative two component transcriptional regulator, winged helix family  61.54 
 
 		 249 aa  270  1e-71  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013721  HMPREF0424_0189  transcriptional regulatory protein, C-terminal domain protein  53.17 
 
 		 296 aa  268  8.999999999999999e-71  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_009380  Strop_0293  winged helix family two component response transcriptional regulator  61.43 
 
 		 239 aa  266  2.9999999999999995e-70  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_4525  response regulator receiver protein  63.59 
 
 		 257 aa  265  5e-70  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_4612  response regulator receiver protein  63.59 
 
 		 257 aa  265  5e-70  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_5097  response regulator receiver protein  64.71 
 
 		 267 aa  265  5e-70  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_4908  response regulator receiver protein  63.59 
 
 		 257 aa  265  5e-70  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_1650  response regulator receiver protein  64.71 
 
 		 278 aa  265  5.999999999999999e-70  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0110992  normal  1 
 
 
-
 
NC_009953  Sare_0337  winged helix family two component response transcriptional regulator  61.16 
 
 		 239 aa  265  7e-70  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0279779 
 
 
-
 
NC_013159  Svir_37670  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  62.05 
 
 		 256 aa  259  3e-68  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.0528352 
 
 
-
 
NC_009565  TBFG_10833  transcriptional regulatory protein  63.05 
 
 		 255 aa  259  3e-68  Mycobacterium tuberculosis F11  Bacteria  normal  1  hitchhiker  0.00597919 
 
 
-
 
NC_013947  Snas_6372  putative two component transcriptional regulator, winged helix family  59.91 
 
 		 236 aa  254  7e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_4983  putative two component transcriptional regulator, winged helix family  60.63 
 
 		 232 aa  249  3e-65  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_3545  putative two component transcriptional regulator, winged helix family  60 
 
 		 243 aa  247  1e-64  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.61486  n/a   
 
 
-
 
NC_013441  Gbro_3935  transcriptional regulator domain protein  58.72 
 
 		 270 aa  247  1e-64  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013169  Ksed_03550  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  43.96 
 
 		 261 aa  144  1e-33  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.329191  normal  1 
 
 
-
 
NC_009565  TBFG_12898  transcriptional regulator  43.56 
 
 		 252 aa  140  3e-32  Mycobacterium tuberculosis F11  Bacteria  normal  0.385025  normal  1 
 
 
-
 
NC_013440  Hoch_6843  putative two component transcriptional regulator, winged helix family  41.98 
 
 		 258 aa  136  3.0000000000000003e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013124  Afer_0241  putative two component transcriptional regulator, winged helix family  55.12 
 
 		 217 aa  131  9e-30  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  39.34 
 
 		 232 aa  127  2.0000000000000002e-28  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1126  transcriptional regulator  49.62 
 
 		 223 aa  124  2e-27  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.0000289398  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  38.92 
 
 		 223 aa  124  2e-27  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  38.38 
 
 		 223 aa  123  2e-27  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK1193  response regulator  38.92 
 
 		 223 aa  124  2e-27  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  38.38 
 
 		 223 aa  123  2e-27  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_944  transcriptional regulator  49.62 
 
 		 223 aa  123  2e-27  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  38.92 
 
 		 223 aa  123  3e-27  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_005957  BT9727_1191  response regulator  38.38 
 
 		 223 aa  123  3e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  38.92 
 
 		 223 aa  123  3e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  38.92 
 
 		 223 aa  123  3e-27  Bacillus cereus G9842  Bacteria  normal  1  normal  0.910988 
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  37.78 
 
 		 226 aa  123  3e-27  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_013170  Ccur_08240  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  48.41 
 
 		 236 aa  122  5e-27  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.956318  normal  0.778898 
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  37.84 
 
 		 228 aa  122  6e-27  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_009455  DehaBAV1_0955  two component transcriptional regulator  50.38 
 
 		 223 aa  121  9.999999999999999e-27  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  38.38 
 
 		 223 aa  120  1.9999999999999998e-26  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  38.38 
 
 		 223 aa  120  1.9999999999999998e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  41.62 
 
 		 231 aa  120  1.9999999999999998e-26  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  39.89 
 
 		 240 aa  120  1.9999999999999998e-26  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal  1 
 
 
-
 
NC_011830  Dhaf_2286  two component transcriptional regulator, winged helix family  38.89 
 
 		 231 aa  120  1.9999999999999998e-26  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000188753  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  38.92 
 
 		 229 aa  119  3e-26  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.834843 
 
 
-
 
NC_009674  Bcer98_1021  two component transcriptional regulator  37.84 
 
 		 223 aa  119  3e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_3419  two component transcriptional regulator  40.44 
 
 		 242 aa  120  3e-26  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_19870  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  50 
 
 		 224 aa  119  3.9999999999999996e-26  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.931606  normal  1 
 
 
-
 
NC_011830  Dhaf_1756  two component transcriptional regulator, winged helix family  37.22 
 
 		 230 aa  119  3.9999999999999996e-26  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.769657  n/a   
 
 
-
 
NC_013204  Elen_0258  two component transcriptional regulator, winged helix family  39.34 
 
 		 236 aa  119  4.9999999999999996e-26  Eggerthella lenta DSM 2243  Bacteria  normal  0.606292  normal  1 
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  37.43 
 
 		 228 aa  119  4.9999999999999996e-26  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  39.34 
 
 		 236 aa  119  6e-26  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal  1 
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  39.29 
 
 		 234 aa  119  6e-26  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  37.5 
 
 		 235 aa  118  7e-26  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  35.82 
 
 		 239 aa  118  7e-26  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  34.92 
 
 		 233 aa  118  7e-26  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  hitchhiker  0.00991602 
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  35.82 
 
 		 239 aa  118  7e-26  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  38.2 
 
 		 227 aa  118  9e-26  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  38.83 
 
 		 237 aa  117  9.999999999999999e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  38.22 
 
 		 232 aa  117  9.999999999999999e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1162  transcriptional regulator, putative  41.72 
 
 		 238 aa  117  1.9999999999999998e-25  Dehalococcoides ethenogenes 195  Bacteria  normal  0.829609  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  37.84 
 
 		 235 aa  117  1.9999999999999998e-25  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009253  Dred_1903  two component transcriptional regulator  36.76 
 
 		 230 aa  117  1.9999999999999998e-25  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  37.63 
 
 		 235 aa  116  3e-25  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_013204  Elen_2015  putative two component transcriptional regulator, winged helix family  46.4 
 
 		 224 aa  116  3e-25  Eggerthella lenta DSM 2243  Bacteria  normal  0.0839248  hitchhiker  0.0000000000000188648 
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  38.17 
 
 		 235 aa  116  3e-25  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_010001  Cphy_0154  two component transcriptional regulator  33.68 
 
 		 238 aa  116  3e-25  Clostridium phytofermentans ISDg  Bacteria  normal  0.644268  n/a   
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  39.79 
 
 		 239 aa  116  3.9999999999999997e-25  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_010001  Cphy_3429  two component transcriptional regulator  37.57 
 
 		 233 aa  115  5e-25  Clostridium phytofermentans ISDg  Bacteria  normal  0.0608192  n/a   
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  38.42 
 
 		 235 aa  115  5e-25  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_008699  Noca_2939  response regulator receiver  43.02 
 
 		 232 aa  115  5e-25  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  36.79 
 
 		 242 aa  115  6e-25  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  37.04 
 
 		 228 aa  115  6e-25  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  37.63 
 
 		 235 aa  115  6.9999999999999995e-25  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  37.63 
 
 		 235 aa  115  6.9999999999999995e-25  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  37.63 
 
 		 235 aa  115  7.999999999999999e-25  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  37.63 
 
 		 235 aa  115  7.999999999999999e-25  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  37.63 
 
 		 235 aa  115  7.999999999999999e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  37.63 
 
 		 235 aa  115  7.999999999999999e-25  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  38.12 
 
 		 230 aa  115  7.999999999999999e-25  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  37.63 
 
 		 235 aa  115  7.999999999999999e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  37.63 
 
 		 235 aa  115  7.999999999999999e-25  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  37.63 
 
 		 235 aa  115  7.999999999999999e-25  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  36.96 
 
 		 235 aa  115  8.999999999999998e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  38.42 
 
 		 229 aa  114  1.0000000000000001e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
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