More than 300 homologs were found in PanDaTox collection
for query gene Sked_04480 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013521  Sked_04480  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  100 
 
 		 232 aa  451  1.0000000000000001e-126  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.226813 
 
 
-
 
NC_011886  Achl_0805  putative two component transcriptional regulator, winged helix family  40.68 
 
 		 288 aa  116  1.9999999999999998e-25  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008541  Arth_0657  response regulator receiver protein  38.32 
 
 		 290 aa  113  2.0000000000000002e-24  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_0355  putative two component transcriptional regulator, winged helix family  59.05 
 
 		 316 aa  110  2.0000000000000002e-23  Jonesia denitrificans DSM 20603  Bacteria  normal  0.708183  normal  0.960325 
 
 
-
 
NC_012803  Mlut_03350  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  39.17 
 
 		 262 aa  107  2e-22  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_2331  putative winged helix family two component transcriptional regulator  57.3 
 
 		 166 aa  93.6  2e-18  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.836335 
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  50.46 
 
 		 243 aa  88.2  1e-16  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_03260  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  45.36 
 
 		 251 aa  87.8  1e-16  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  54.44 
 
 		 241 aa  87  2e-16  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.0000121276 
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  49.5 
 
 		 259 aa  86.3  3e-16  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  53.33 
 
 		 240 aa  85.1  9e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_8253  putative two component transcriptional regulator, winged helix family  50.56 
 
 		 264 aa  83.2  0.000000000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0895  response regulator receiver protein  48.48 
 
 		 237 aa  82.8  0.000000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010816  BLD_1194  putative response regulator  48.94 
 
 		 266 aa  82.8  0.000000000000004  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  50 
 
 		 232 aa  82.4  0.000000000000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_013721  HMPREF0424_0189  transcriptional regulatory protein, C-terminal domain protein  47.92 
 
 		 296 aa  82  0.000000000000007  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  50 
 
 		 232 aa  82  0.000000000000008  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_013169  Ksed_03550  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  49.49 
 
 		 261 aa  81.6  0.000000000000009  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.329191  normal  1 
 
 
-
 
NC_009921  Franean1_7218  winged helix family two component response transcriptional regulator  54.35 
 
 		 124 aa  81.6  0.000000000000009  Frankia sp. EAN1pec  Bacteria  normal  0.18436  normal  1 
 
 
-
 
NC_013757  Gobs_4646  putative two component transcriptional regulator, winged helix family  50 
 
 		 249 aa  81.3  0.00000000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0595  putative two component transcriptional regulator, winged helix family  48.6 
 
 		 237 aa  81.3  0.00000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_0439  putative two component transcriptional regulator, winged helix family  45.87 
 
 		 248 aa  80.5  0.00000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.190602 
 
 
-
 
NC_007333  Tfu_1238  response regulator receiver  54.65 
 
 		 218 aa  80.1  0.00000000000003  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_1389  putative two component transcriptional regulator, winged helix family  54.44 
 
 		 171 aa  79.7  0.00000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.287988  hitchhiker  0.00961108 
 
 
-
 
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  48.39 
 
 		 251 aa  80.1  0.00000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_009921  Franean1_6176  winged helix family two component response transcriptional regulator  49.47 
 
 		 247 aa  79.7  0.00000000000004  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.186762 
 
 
-
 
NC_007777  Francci3_0443  response regulator receiver protein  49.47 
 
 		 250 aa  79.3  0.00000000000004  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_2025  response regulator receiver protein  47.31 
 
 		 261 aa  79  0.00000000000005  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_6372  putative two component transcriptional regulator, winged helix family  50.55 
 
 		 236 aa  79  0.00000000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_3935  transcriptional regulator domain protein  51.14 
 
 		 270 aa  79  0.00000000000006  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013170  Ccur_08240  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  47.78 
 
 		 236 aa  79  0.00000000000006  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.956318  normal  0.778898 
 
 
-
 
NC_007333  Tfu_2737  transcriptional regulatory protein  47.92 
 
 		 253 aa  78.6  0.00000000000007  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_3545  putative two component transcriptional regulator, winged helix family  46.15 
 
 		 243 aa  78.6  0.00000000000008  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.61486  n/a   
 
 
-
 
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  48 
 
 		 249 aa  78.6  0.00000000000008  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal  1 
 
 
-
 
NC_013124  Afer_0241  putative two component transcriptional regulator, winged helix family  47.19 
 
 		 217 aa  77.8  0.0000000000001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  47.92 
 
 		 255 aa  78.2  0.0000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_10833  transcriptional regulatory protein  45.38 
 
 		 255 aa  77.4  0.0000000000002  Mycobacterium tuberculosis F11  Bacteria  normal  1  hitchhiker  0.00597919 
 
 
-
 
NC_013235  Namu_4983  putative two component transcriptional regulator, winged helix family  48.94 
 
 		 232 aa  77.4  0.0000000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_4240  transcriptional regulator domain-containing protein  45.92 
 
 		 257 aa  77.4  0.0000000000002  Nocardioides sp. JS614  Bacteria  normal  0.466466  n/a   
 
 
-
 
NC_009953  Sare_0337  winged helix family two component response transcriptional regulator  48.39 
 
 		 239 aa  76.6  0.0000000000003  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0279779 
 
 
-
 
NC_009380  Strop_0293  winged helix family two component response transcriptional regulator  48.91 
 
 		 239 aa  76.6  0.0000000000003  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_6823  putative two component transcriptional regulator, winged helix family  49.44 
 
 		 250 aa  76.3  0.0000000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_1650  response regulator receiver protein  43.2 
 
 		 278 aa  76.3  0.0000000000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0110992  normal  1 
 
 
-
 
NC_008726  Mvan_5097  response regulator receiver protein  45.1 
 
 		 267 aa  75.9  0.0000000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_19870  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  47.78 
 
 		 224 aa  75.5  0.0000000000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.931606  normal  1 
 
 
-
 
NC_013093  Amir_6380  two component transcriptional regulator, winged helix family  43.48 
 
 		 223 aa  75.5  0.0000000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  0.654273  n/a   
 
 
-
 
NC_008146  Mmcs_4525  response regulator receiver protein  42.97 
 
 		 257 aa  75.9  0.0000000000006  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_4612  response regulator receiver protein  42.97 
 
 		 257 aa  75.9  0.0000000000006  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_4908  response regulator receiver protein  42.97 
 
 		 257 aa  75.9  0.0000000000006  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  47.83 
 
 		 227 aa  75.5  0.0000000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.0239565 
 
 
-
 
NC_013205  Aaci_1728  two component transcriptional regulator, winged helix family  39.8 
 
 		 233 aa  75.1  0.0000000000009  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_1224  two component transcriptional regulator, winged helix family  44.32 
 
 		 227 aa  74.7  0.000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0117785  hitchhiker  0.00926138 
 
 
-
 
NC_013159  Svir_37670  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  48.31 
 
 		 256 aa  74.3  0.000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.0528352 
 
 
-
 
NC_013204  Elen_2015  putative two component transcriptional regulator, winged helix family  47.83 
 
 		 224 aa  75.1  0.000000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.0839248  hitchhiker  0.0000000000000188648 
 
 
-
 
NC_013093  Amir_5007  two component transcriptional regulator, winged helix family  45.45 
 
 		 238 aa  74.3  0.000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1162  transcriptional regulator, putative  44.57 
 
 		 238 aa  73.9  0.000000000002  Dehalococcoides ethenogenes 195  Bacteria  normal  0.829609  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  47.92 
 
 		 227 aa  73.9  0.000000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_010506  Swoo_4783  two component transcriptional regulator  45.56 
 
 		 225 aa  74.3  0.000000000002  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.000784885  unclonable  0.00000000984925 
 
 
-
 
NC_013131  Caci_3539  two component transcriptional regulator, winged helix family  42.53 
 
 		 268 aa  73.6  0.000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.224989  normal  1 
 
 
-
 
NC_013411  GYMC61_0402  two component transcriptional regulator, winged helix family  41.67 
 
 		 241 aa  73.9  0.000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009953  Sare_1768  two component transcriptional regulator  48.39 
 
 		 229 aa  73.9  0.000000000002  Salinispora arenicola CNS-205  Bacteria  normal  0.0372211  hitchhiker  0.00235645 
 
 
-
 
NC_013510  Tcur_3363  two component transcriptional regulator, winged helix family  48.45 
 
 		 233 aa  73.9  0.000000000002  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00866984  n/a   
 
 
-
 
NC_009831  Ssed_4392  two component transcriptional regulator  45.56 
 
 		 225 aa  73.6  0.000000000002  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.0025821  decreased coverage  0.00000564878 
 
 
-
 
NC_011772  BCG9842_B3814  DNA-binding response regulator ResD  41.67 
 
 		 238 aa  73.2  0.000000000003  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  3.95849e-16 
 
 
-
 
NC_011658  BCAH187_A1637  DNA-binding response regulator ResD  41.67 
 
 		 250 aa  73.2  0.000000000003  Bacillus cereus AH187  Bacteria  normal  0.0246031  n/a   
 
 
-
 
NC_003909  BCE_1601  DNA-binding response regulator ResD  41.67 
 
 		 250 aa  73.2  0.000000000003  Bacillus cereus ATCC 10987  Bacteria  normal  0.953648  n/a   
 
 
-
 
NC_005945  BAS1386  DNA-binding response regulator ResD  41.67 
 
 		 238 aa  73.2  0.000000000003  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_1569  DNA-binding response regulator ResD  41.67 
 
 		 250 aa  73.2  0.000000000003  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.45334e-32 
 
 
-
 
NC_005957  BT9727_1359  response regulator  41.67 
 
 		 238 aa  73.2  0.000000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0319788  n/a   
 
 
-
 
NC_011725  BCB4264_A1531  DNA-binding response regulator ResD  41.67 
 
 		 238 aa  73.2  0.000000000003  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_3904  two component transcriptional regulator, winged helix family  48.19 
 
 		 230 aa  73.2  0.000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.144495  normal  1 
 
 
-
 
NC_006274  BCZK1358  response regulator  41.67 
 
 		 238 aa  73.2  0.000000000003  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_1497  DNA-binding response regulator ResD  41.67 
 
 		 238 aa  73.2  0.000000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.862661  n/a   
 
 
-
 
NC_008261  CPF_2811  DNA-binding response regulator  42.11 
 
 		 228 aa  73.6  0.000000000003  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_2497  DNA-binding response regulator  42.11 
 
 		 228 aa  73.6  0.000000000003  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1600  two component transcriptional regulator  46.59 
 
 		 224 aa  73.2  0.000000000003  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000237714  n/a   
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  47.19 
 
 		 230 aa  72.8  0.000000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_007333  Tfu_1501  response regulator  47.73 
 
 		 206 aa  72.8  0.000000000004  Thermobifida fusca YX  Bacteria  normal  0.117784  n/a   
 
 
-
 
NC_013235  Namu_4223  two component transcriptional regulator, winged helix family  44.57 
 
 		 226 aa  73.2  0.000000000004  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.000102305  normal  0.0938221 
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  40.68 
 
 		 228 aa  72.8  0.000000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_2671  two component transcriptional regulator, winged helix family  51.32 
 
 		 243 aa  72.4  0.000000000005  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1399  two component transcriptional regulator  40.62 
 
 		 238 aa  72.8  0.000000000005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.129694  n/a   
 
 
-
 
NC_009953  Sare_2299  winged helix family two component response transcriptional regulator  46.53 
 
 		 203 aa  72.4  0.000000000005  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.00499113 
 
 
-
 
NC_008699  Noca_2939  response regulator receiver  46.39 
 
 		 232 aa  72.4  0.000000000005  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_2147  transcriptional regulator domain-containing protein  46.53 
 
 		 203 aa  72.8  0.000000000005  Salinispora tropica CNB-440  Bacteria  normal  0.162923  normal  0.29273 
 
 
-
 
NC_012793  GWCH70_2219  two component transcriptional regulator, winged helix family  40.62 
 
 		 240 aa  72.4  0.000000000006  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_6985  two component transcriptional regulator  49.48 
 
 		 229 aa  72  0.000000000006  Frankia sp. EAN1pec  Bacteria  normal  0.0162975  normal  1 
 
 
-
 
NC_008700  Sama_3534  response regulator receiver protein  46.07 
 
 		 225 aa  72.4  0.000000000006  Shewanella amazonensis SB2B  Bacteria  normal  0.868885  normal  1 
 
 
-
 
NC_013174  Jden_1871  two component transcriptional regulator, winged helix family  46.81 
 
 		 226 aa  72  0.000000000006  Jonesia denitrificans DSM 20603  Bacteria  normal  0.105791  normal  0.266081 
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  47.73 
 
 		 235 aa  72  0.000000000007  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.203788 
 
 
-
 
NC_010655  Amuc_1728  two component transcriptional regulator, winged helix family  37.5 
 
 		 234 aa  72  0.000000000008  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.541096  normal  1 
 
 
-
 
NC_013093  Amir_4014  putative two component transcriptional regulator, winged helix family  51.11 
 
 		 166 aa  72  0.000000000008  Actinosynnema mirum DSM 43827  Bacteria  normal  0.572334  n/a   
 
 
-
 
NC_007644  Moth_0827  two component transcriptional regulator  41 
 
 		 256 aa  72  0.000000000008  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00211389  normal  0.244563 
 
 
-
 
NC_009674  Bcer98_1200  two component transcriptional regulator  39.58 
 
 		 238 aa  71.6  0.000000000009  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_4110  two component transcriptional regulator  46.07 
 
 		 225 aa  71.2  0.00000000001  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  40.43 
 
 		 227 aa  71.2  0.00000000001  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  46.07 
 
 		 236 aa  71.2  0.00000000001  Magnetococcus sp. MC-1  Bacteria  normal  1  decreased coverage  0.00391258 
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  50.59 
 
 		 230 aa  71.6  0.00000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_1197  response regulator receiver  44.79 
 
 		 230 aa  71.2  0.00000000001  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_1781  response regulator receiver  48.39 
 
 		 226 aa  71.2  0.00000000001  Salinispora tropica CNB-440  Bacteria  normal  0.365073  normal  1 
 
 
-
 
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