| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_04930 |
|---|
| Symbol | |
|---|
| ID | 8632130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 548408 |
|---|
| End bp | 549157 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain |
|---|
| Protein accession | YP_003313288 |
|---|
| Protein GI | 269793833 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.793732 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGAGC TCCTGCTCCT CACCCCCACT GCGGGTGGTT CTGCCCAGGT GCTCCCTGCC
CTCGGTCTGC TGACGCACCG CATCCGGGTG CTCCCGATGG AGCCCTCCGC GCTGGTCGAC
GCGCCCGACT CCGACGTCGT CCTGCTCGAC GCCCGCCGCG ACCTCGTCGG TGCCCGCACC
ACGTGCCGGC TGCTGCGCGC GACCGGGCTC ACCGTGCCCC TCGTCCTCAT CGTCACCGAG
GGCGGCCTCA TGGTCGTCAC CGCCGAGTGG GGCGCCGACG ACCTGCTCCT CGACACCGCG
ACGCCCGCCG AGGTCGAGGC CCGGCTGCGC CTGGCGCGCG AGCGCTCGGC CAGCCACGGC
TCGGGCGACC AGCCCGAGGA GATCTCCTCG GGCGAGCTGA TGATCGACGC GAGCGGCTAC
ACCGCCCGCC TGCGCGGCAC GCCGCTCGAC CTCACCTACA AGGAGTTCGA GCTCCTCAAG
TACCTCGTGC AGCACCCGGG GCGCGTCTTC ACGCGAGCCC AGCTGCTGCA GGAGGTGTGG
GGCTACGACT ACTACGGGGG CACCCGGACG GTCGACGTCC ACGTGCGGCG CCTGCGCGCC
AAGCTGGGGC CCGAGTACGA GCAGCTCATC GGGACCGTGC GCAACGTCGG CTACAGGTTC
GACCCGCCCA AGGACCGTCG GGCGGCGCAG GCGGCGGACA ACGCGGCCCT GGAGCAGGCC
GGCTCTGCTC CGGTAGGTTC GGACCGGTGA
|
|---|
| Protein sequence | MSELLLLTPT AGGSAQVLPA LGLLTHRIRV LPMEPSALVD APDSDVVLLD ARRDLVGART
TCRLLRATGL TVPLVLIVTE GGLMVVTAEW GADDLLLDTA TPAEVEARLR LARERSASHG
SGDQPEEISS GELMIDASGY TARLRGTPLD LTYKEFELLK YLVQHPGRVF TRAQLLQEVW
GYDYYGGTRT VDVHVRRLRA KLGPEYEQLI GTVRNVGYRF DPPKDRRAAQ AADNAALEQA
GSAPVGSDR
|
|---|
| |