| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0189 |
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| Symbol | |
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| ID | 8709834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 210750 |
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| End bp | 211640 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482308 |
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| Product | transcriptional regulatory protein, C-terminal domain protein |
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| Protein accession | YP_003373453 |
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| Protein GI | 283782699 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTGT TGCGCTTATC GCTATTTTTC GCAGTATGGT TTACAATTCC TGTAAAGGCT
GAATTTGCTA CTACATCAAT TGTTTGTTGG AGGCATCATA TGACTGATAT CACATTGATG
ACTTCGTGTG CTTCTCCCTC TTCAGTTTTA CCTTCACTTA CTTTGTTATC TCATAAAGTG
CGTTTACTTT CTTTGGATAC GTCAAGTTTG GCAAAACTGC CCGCACAAAC CATTCTTTTG
CTTGATGCGC GTGAGGATTT AGCTCTCGCT AAATCAATGT GTTCTTCTCT GCGTGTTGCA
AATATTACGG TTCCTGTCAT ATTAGTTATA ACTGAGGGTG GTTTTACTGT AGTAAATCCT
TCGTGGAACA TTTCTGATGT TGTGCTGACT AATGCTTCTC CTGCAGAAGT AGAAGGTCGT
TTGCGTTTGG CTTCTTTGCA ACACGGATCT TCTGATGATT TATTTGTGCA TTCGCAAGGC
TCTGAAATTG ATGATTCTTT CAATTCAGAC AATGGAACTA TGCGTTCTGG AGATCTCGTT
GTAGATATGC GTAGCTACAC AGTGAGTTTG CATGGTCATC CTGTTGATTT AGCTTATAAA
GAATTTGAAT TGCTGAAATA CTTTGTGCAG CATCCGCGCA GGGTGTTTAC TCGCACTCAT
TTGTTGCAAG AAGTATGGGG CTACGACTAC TACGGTGGCA CTCGTACTGT AGATGTCCAT
ATTCGTAGGC TCCGTGCAAA ACTTGGTGTT GAATATGAAC ATTTGATTGG CACAGTGCGT
AATGTTGGCT ATCGCTTCGA TCCTTCGGAA TCAGATGAGA ATAGCGAGAT TTCCGAAAGC
AGCATTGAAG ATGATTCTGA AAATGATGCA GATAAGCAGT CTGCGCAATA A
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| Protein sequence | MQVLRLSLFF AVWFTIPVKA EFATTSIVCW RHHMTDITLM TSCASPSSVL PSLTLLSHKV
RLLSLDTSSL AKLPAQTILL LDAREDLALA KSMCSSLRVA NITVPVILVI TEGGFTVVNP
SWNISDVVLT NASPAEVEGR LRLASLQHGS SDDLFVHSQG SEIDDSFNSD NGTMRSGDLV
VDMRSYTVSL HGHPVDLAYK EFELLKYFVQ HPRRVFTRTH LLQEVWGYDY YGGTRTVDVH
IRRLRAKLGV EYEHLIGTVR NVGYRFDPSE SDENSEISES SIEDDSENDA DKQSAQ
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