More than 300 homologs were found in PanDaTox collection
for query gene Xcel_3035 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  100 
 
 
243 aa  477  1e-134  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  84.62 
 
 
241 aa  399  9.999999999999999e-111  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000121276 
 
 
-
 
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  84.96 
 
 
249 aa  385  1e-106  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal 
 
 
-
 
NC_013174  Jden_0439  putative two component transcriptional regulator, winged helix family  74.69 
 
 
248 aa  359  2e-98  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.190602 
 
 
-
 
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  77.88 
 
 
240 aa  352  2e-96  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0595  putative two component transcriptional regulator, winged helix family  72.07 
 
 
237 aa  308  4e-83  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0895  response regulator receiver protein  66.96 
 
 
237 aa  306  1.0000000000000001e-82  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  63.49 
 
 
251 aa  304  9.000000000000001e-82  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_010816  BLD_1194  putative response regulator  64.14 
 
 
266 aa  299  2e-80  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_2025  response regulator receiver protein  64.63 
 
 
261 aa  296  2e-79  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  67.86 
 
 
259 aa  295  5e-79  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  64.09 
 
 
232 aa  291  5e-78  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_013131  Caci_8253  putative two component transcriptional regulator, winged helix family  69.16 
 
 
264 aa  291  7e-78  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0443  response regulator receiver protein  63.14 
 
 
250 aa  289  2e-77  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6176  winged helix family two component response transcriptional regulator  65.02 
 
 
247 aa  288  4e-77  Frankia sp. EAN1pec  Bacteria  normal  normal  0.186762 
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  64.09 
 
 
232 aa  288  7e-77  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_007333  Tfu_2737  transcriptional regulatory protein  66.08 
 
 
253 aa  280  1e-74  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4240  transcriptional regulator domain-containing protein  63.89 
 
 
257 aa  276  2e-73  Nocardioides sp. JS614  Bacteria  normal  0.466466  n/a   
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  61.44 
 
 
255 aa  272  4.0000000000000004e-72  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4525  response regulator receiver protein  64.06 
 
 
257 aa  271  8.000000000000001e-72  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4612  response regulator receiver protein  64.06 
 
 
257 aa  271  8.000000000000001e-72  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4908  response regulator receiver protein  64.06 
 
 
257 aa  271  8.000000000000001e-72  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4646  putative two component transcriptional regulator, winged helix family  62.9 
 
 
249 aa  269  2e-71  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1650  response regulator receiver protein  62.67 
 
 
278 aa  265  5e-70  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0110992  normal 
 
 
-
 
NC_009953  Sare_0337  winged helix family two component response transcriptional regulator  59.31 
 
 
239 aa  263  1e-69  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0279779 
 
 
-
 
NC_009380  Strop_0293  winged helix family two component response transcriptional regulator  60.17 
 
 
239 aa  263  1e-69  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5097  response regulator receiver protein  65.02 
 
 
267 aa  263  2e-69  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6823  putative two component transcriptional regulator, winged helix family  62.72 
 
 
250 aa  261  6.999999999999999e-69  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10833  transcriptional regulatory protein  63.55 
 
 
255 aa  260  1e-68  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00597919 
 
 
-
 
NC_013721  HMPREF0424_0189  transcriptional regulatory protein, C-terminal domain protein  55.42 
 
 
296 aa  260  2e-68  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013159  Svir_37670  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  62.72 
 
 
256 aa  258  4e-68  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.0528352 
 
 
-
 
NC_013235  Namu_4983  putative two component transcriptional regulator, winged helix family  59.57 
 
 
232 aa  255  4e-67  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3935  transcriptional regulator domain protein  60.26 
 
 
270 aa  253  2.0000000000000002e-66  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3545  putative two component transcriptional regulator, winged helix family  59.74 
 
 
243 aa  252  4.0000000000000004e-66  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.61486  n/a   
 
 
-
 
NC_013947  Snas_6372  putative two component transcriptional regulator, winged helix family  57.14 
 
 
236 aa  249  4e-65  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_03550  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  43.96 
 
 
261 aa  146  2.0000000000000003e-34  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.329191  normal 
 
 
-
 
NC_013440  Hoch_6843  putative two component transcriptional regulator, winged helix family  39.53 
 
 
258 aa  137  1e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12898  transcriptional regulator  43.61 
 
 
252 aa  135  5e-31  Mycobacterium tuberculosis F11  Bacteria  normal  0.385025  normal 
 
 
-
 
NC_013124  Afer_0241  putative two component transcriptional regulator, winged helix family  52.34 
 
 
217 aa  129  3e-29  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1162  transcriptional regulator, putative  40.11 
 
 
238 aa  126  2.0000000000000002e-28  Dehalococcoides ethenogenes 195  Bacteria  normal  0.829609  n/a   
 
 
-
 
NC_013552  DhcVS_944  transcriptional regulator  50 
 
 
223 aa  127  2.0000000000000002e-28  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1126  transcriptional regulator  50 
 
 
223 aa  126  3e-28  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.0000289398  n/a   
 
 
-
 
NC_009455  DehaBAV1_0955  two component transcriptional regulator  49.23 
 
 
223 aa  124  1e-27  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  45.77 
 
 
239 aa  124  1e-27  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  40.44 
 
 
232 aa  124  2e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  45.89 
 
 
239 aa  123  3e-27  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  45.89 
 
 
239 aa  123  3e-27  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  41.18 
 
 
229 aa  122  5e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_013204  Elen_2015  putative two component transcriptional regulator, winged helix family  46.4 
 
 
224 aa  121  9e-27  Eggerthella lenta DSM 2243  Bacteria  normal  0.0839248  hitchhiker  0.0000000000000188648 
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  40.91 
 
 
228 aa  120  9.999999999999999e-27  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  39.58 
 
 
235 aa  120  1.9999999999999998e-26  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  40.26 
 
 
228 aa  120  1.9999999999999998e-26  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_013170  Ccur_08240  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  48.44 
 
 
236 aa  119  3e-26  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.956318  normal  0.778898 
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  43.66 
 
 
239 aa  120  3e-26  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_013165  Shel_19870  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  40.54 
 
 
224 aa  119  6e-26  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.931606  normal 
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  38.92 
 
 
223 aa  118  7e-26  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK1193  response regulator  38.92 
 
 
223 aa  118  7e-26  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  38.38 
 
 
223 aa  118  7.999999999999999e-26  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  38.38 
 
 
223 aa  118  7.999999999999999e-26  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  46.38 
 
 
231 aa  117  9.999999999999999e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal 
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  38.92 
 
 
223 aa  117  9.999999999999999e-26  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_005957  BT9727_1191  response regulator  38.38 
 
 
223 aa  117  9.999999999999999e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  38.92 
 
 
223 aa  117  9.999999999999999e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  38.92 
 
 
223 aa  117  9.999999999999999e-26  Bacillus cereus G9842  Bacteria  normal  normal  0.910988 
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  37.7 
 
 
236 aa  118  9.999999999999999e-26  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal 
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  45.11 
 
 
233 aa  117  1.9999999999999998e-25  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00991602 
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  44.93 
 
 
234 aa  117  1.9999999999999998e-25  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_010003  Pmob_0875  two component transcriptional regulator  44.06 
 
 
242 aa  116  3e-25  Petrotoga mobilis SJ95  Bacteria  decreased coverage  0.000486966  n/a   
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  37.16 
 
 
240 aa  116  3e-25  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal 
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  41.06 
 
 
226 aa  116  3e-25  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_008699  Noca_2939  response regulator receiver  48.48 
 
 
232 aa  116  3.9999999999999997e-25  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1073  putative response regulator  40.49 
 
 
234 aa  116  3.9999999999999997e-25  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0444  DNA-binding response regulator  39.89 
 
 
233 aa  115  5e-25  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1903  two component transcriptional regulator  39.62 
 
 
230 aa  115  6e-25  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  38.38 
 
 
223 aa  115  7.999999999999999e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  38.38 
 
 
223 aa  115  8.999999999999998e-25  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  38.89 
 
 
229 aa  115  8.999999999999998e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2216  two component transcriptional regulator  35.33 
 
 
224 aa  114  1.0000000000000001e-24  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  40.79 
 
 
227 aa  114  1.0000000000000001e-24  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_011830  Dhaf_1756  two component transcriptional regulator, winged helix family  36.67 
 
 
230 aa  114  1.0000000000000001e-24  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.769657  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  36.67 
 
 
236 aa  114  2.0000000000000002e-24  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0258  two component transcriptional regulator, winged helix family  37.16 
 
 
236 aa  113  2.0000000000000002e-24  Eggerthella lenta DSM 2243  Bacteria  normal  0.606292  normal 
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  38.92 
 
 
230 aa  114  2.0000000000000002e-24  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  39.01 
 
 
225 aa  113  2.0000000000000002e-24  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3419  two component transcriptional regulator  37.5 
 
 
242 aa  114  2.0000000000000002e-24  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  45 
 
 
235 aa  113  3e-24  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_013203  Apar_1349  two component transcriptional regulator, winged helix family  37.02 
 
 
237 aa  113  3e-24  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.421984 
 
 
-
 
NC_008025  Dgeo_0130  two component transcriptional regulator  47.79 
 
 
229 aa  113  3e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.848842  normal 
 
 
-
 
NC_009674  Bcer98_1021  two component transcriptional regulator  37.3 
 
 
223 aa  113  3e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1752  two component transcriptional regulator, winged helix family  34.43 
 
 
228 aa  112  4.0000000000000004e-24  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000101966  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  34.57 
 
 
230 aa  112  4.0000000000000004e-24  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0064  DNA-binding response regulator  37.56 
 
 
235 aa  112  4.0000000000000004e-24  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.611294  normal 
 
 
-
 
NC_011830  Dhaf_2286  two component transcriptional regulator, winged helix family  36.22 
 
 
231 aa  112  4.0000000000000004e-24  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000188753  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  37.17 
 
 
232 aa  112  4.0000000000000004e-24  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  38.3 
 
 
235 aa  112  5e-24  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  37.57 
 
 
228 aa  112  5e-24  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  45.52 
 
 
237 aa  112  6e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008009  Acid345_2990  two component transcriptional regulator  44.93 
 
 
230 aa  112  6e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.140246 
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  37.97 
 
 
235 aa  112  6e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  38.86 
 
 
226 aa  112  6e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
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