Gene Sterm_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1086 
Symbol 
ID8596565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand- 
Start bp1189649 
End bp1190314 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content33% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003307885 
Protein GI269119708 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA AGATTTTAAT AGTAGAAGAT GAAGTGAATC TTATGGAGGT TCTGGAAGAT 
ACCCTTCTTG AGGAAAACTT TGAAATTTTC AAAGCATACG AAGGCTCTGC CGCTATAGAT 
ATGTTCTATG AAGTGAATCC GGATCTGGTA CTTCTGGATA TAAATCTTCC GAAAAAAGAC 
GGCTGGACCA TATGCAAAGA AATAAGAAAT GATTCCAATA AGCCTATTAT AATAATGACT 
GCAAGGGACA CGGAACTGGA TGAGCTAAAA GGTCTCAGCA TAGGAGCTGA TGATTATATT 
ACCAAACCTT TCAGTCTGAA AATCCTTACC CTCAGAATAA AAAAGCTTCT TAAAATAGAA 
AATGAGGATT ATTATCTGTA TGAAACATTA AGATTTAATT TTGGGACTTA TGAACTTATA 
ATTGATTCAC AAAATATAGA AATTACGAAA AAAGAAAGTT TATTTCTGGA TTATATAATA 
AAAAATAAAG GAAAACTTCT GACAAGAGAT ATGCTCCTCA ATGAAGTGTG GGGTTATGAT 
TTTGACGGGG ATAACCGTGT TGTAGACACA CTTATAAAAA GAACAAGAAA GAAGCTTTCT 
CCTTATGGAG ATCTTATAAA AACAGTGCGT GGAATGGGGT ATATGTTTGA TGAAAGTAAA 
AATTAG
 
Protein sequence
MKKKILIVED EVNLMEVLED TLLEENFEIF KAYEGSAAID MFYEVNPDLV LLDINLPKKD 
GWTICKEIRN DSNKPIIIMT ARDTELDELK GLSIGADDYI TKPFSLKILT LRIKKLLKIE 
NEDYYLYETL RFNFGTYELI IDSQNIEITK KESLFLDYII KNKGKLLTRD MLLNEVWGYD 
FDGDNRVVDT LIKRTRKKLS PYGDLIKTVR GMGYMFDESK N