| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4891 |
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| Symbol | |
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| ID | 7971585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5208830 |
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| End bp | 5209579 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795486 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_002946761 |
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| Protein GI | 239817851 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGGCG AGGTCATTCG CCACCTTCTT GTCAGGAGGC ACAATCCCGC CATGCCGCGC
ATCCTGCTGA TCGACGACGA CGAACATCTC GCCGCGCCGC TGACCACCTA CTTCGCCCGC
TTCGGCTACA CGCTGGAGAG CGCGGTGCGC CCGAGCGAAG GGCTCGCCAA ATTGCGCGCG
GGCCCGTTCG ACGCGGCGAT CCTCGACGTG ATGCTACCCG AGATGGACGG CTTTGCGCTG
TGCCGCGAGA TCCGCAAGGA GAGCGACATT CCCATCGTGA TGCTCACCGC GCGCGGCGAG
GTGATGGACC GCGTGGTCGG CCTCGAGCTG GGCGCCGACG ACTACGTGCC CAAGCCCTTC
GAGCCGCGCG AGCTGGTGGC GCGCGTGCAG ACCATCCTGC GCCGCCAGCG CAGCACGCCG
GCGGCGGCCA ACGGCAACGG CACCCAGCAC CGCGTGTTCG ACGGGCTGTC GATCGACCTC
GACCGGCGTC AGGTGCTGCG CCATGGCGAG CGCGTGGAGC TCACCGGCAC CGAGTTCGAA
CTGCTCGCGC TGCTGGCGGC CGAGCCCGGC AAGGTGTTCA GCCGCGACGA CATCCTGAAC
CGCCTGCGCG GCCACGAGGC CGAGCTCTAC ACCCGGGCCG TCGACATCGT GGTGAGCCGC
CTGCGCAAGA AGCTCGAGCC GCTGGACTGC ATCAAGACGC TGCGCAATGC CGGCTATGCG
CTGGCCGTCG CGCGCAGCGA GCCTGCATGA
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| Protein sequence | MVGEVIRHLL VRRHNPAMPR ILLIDDDEHL AAPLTTYFAR FGYTLESAVR PSEGLAKLRA
GPFDAAILDV MLPEMDGFAL CREIRKESDI PIVMLTARGE VMDRVVGLEL GADDYVPKPF
EPRELVARVQ TILRRQRSTP AAANGNGTQH RVFDGLSIDL DRRQVLRHGE RVELTGTEFE
LLALLAAEPG KVFSRDDILN RLRGHEAELY TRAVDIVVSR LRKKLEPLDC IKTLRNAGYA
LAVARSEPA
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