Gene Sterm_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0289 
Symbol 
ID8595784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp320577 
End bp321275 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content36% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003307104 
Protein GI269118927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000126796 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA ATACCATTCT TGTTGTAGAG GACGACCTTG AGATAAAAAC TCTCATACAA 
TTTTTTCTTG AGAAAGAAAA TTTTAATGTC ATAACTGCGC AAAACAGTGG AAAAGCTCTG
GAAATGTTAC AGAATAACAA ACCCGAGCTG GTTATTCTGG ATATTATGCT TCCCGGCTTA
AACGGACTGG AAATAGCAAA ATTAATAAAA AAAGAATCAC ATAAATACGG GACACCTTTT
ATTTTCATGC TTACTGCAAA GACCGAAACT GAAGACGTTA TCGACGGCTT TCAGGCCGGA
TGTGACGACT ATCTGAGAAA GCCTTTTGAC CCCCGGGAGC TTATTTTAAG GATAAAAAAG
CTTCTTTCTC TGAAAAAGGA AGGCTTTGCT CCTGAAAAAG AAAGCGGCTT GTTACGATAT
GACCAGATAG AAATTAATCT TGATAAGCAT ACAGTAACAG AAAGCGGAAA TGAAGTCATT
CTTTCCAATA AAGAATTCAG ACTTATTGCT TTCCTTATAC AAAATAAAGG TCTTGCCCTC
AGCAGGGAGA CTATACTGAG CAGGGTATGG AACGAAAATT ATCATCTCGG TGACAGAACA
ATAGATGTCT ATGTAGGAAA AATCCGTGAA AAACTTCCTT CTATATCCGA AAATATAAAA
ACTATAAAAG GAGTTGGATA CCGATTAAAA GAAATTTGA
 
Protein sequence
MKKNTILVVE DDLEIKTLIQ FFLEKENFNV ITAQNSGKAL EMLQNNKPEL VILDIMLPGL 
NGLEIAKLIK KESHKYGTPF IFMLTAKTET EDVIDGFQAG CDDYLRKPFD PRELILRIKK
LLSLKKEGFA PEKESGLLRY DQIEINLDKH TVTESGNEVI LSNKEFRLIA FLIQNKGLAL
SRETILSRVW NENYHLGDRT IDVYVGKIRE KLPSISENIK TIKGVGYRLK EI