Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0289 |
Symbol | |
ID | 8595784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 320577 |
End bp | 321275 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003307104 |
Protein GI | 269118927 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000126796 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAA ATACCATTCT TGTTGTAGAG GACGACCTTG AGATAAAAAC TCTCATACAA TTTTTTCTTG AGAAAGAAAA TTTTAATGTC ATAACTGCGC AAAACAGTGG AAAAGCTCTG GAAATGTTAC AGAATAACAA ACCCGAGCTG GTTATTCTGG ATATTATGCT TCCCGGCTTA AACGGACTGG AAATAGCAAA ATTAATAAAA AAAGAATCAC ATAAATACGG GACACCTTTT ATTTTCATGC TTACTGCAAA GACCGAAACT GAAGACGTTA TCGACGGCTT TCAGGCCGGA TGTGACGACT ATCTGAGAAA GCCTTTTGAC CCCCGGGAGC TTATTTTAAG GATAAAAAAG CTTCTTTCTC TGAAAAAGGA AGGCTTTGCT CCTGAAAAAG AAAGCGGCTT GTTACGATAT GACCAGATAG AAATTAATCT TGATAAGCAT ACAGTAACAG AAAGCGGAAA TGAAGTCATT CTTTCCAATA AAGAATTCAG ACTTATTGCT TTCCTTATAC AAAATAAAGG TCTTGCCCTC AGCAGGGAGA CTATACTGAG CAGGGTATGG AACGAAAATT ATCATCTCGG TGACAGAACA ATAGATGTCT ATGTAGGAAA AATCCGTGAA AAACTTCCTT CTATATCCGA AAATATAAAA ACTATAAAAG GAGTTGGATA CCGATTAAAA GAAATTTGA
|
Protein sequence | MKKNTILVVE DDLEIKTLIQ FFLEKENFNV ITAQNSGKAL EMLQNNKPEL VILDIMLPGL NGLEIAKLIK KESHKYGTPF IFMLTAKTET EDVIDGFQAG CDDYLRKPFD PRELILRIKK LLSLKKEGFA PEKESGLLRY DQIEINLDKH TVTESGNEVI LSNKEFRLIA FLIQNKGLAL SRETILSRVW NENYHLGDRT IDVYVGKIRE KLPSISENIK TIKGVGYRLK EI
|
| |