Gene Pfl01_3379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3379 
Symbol 
ID3713329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3853084 
End bp3853755 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content62% 
IMG OID 
Producttwo component heavy metal response transcriptional regulator 
Protein accessionYP_349108 
Protein GI77459601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCC TTGTTGTCGA AGACGAACCC AAGGCCGGCA ATTATTTGCT CAACGGCTTG 
CAGGAACTGG GCTACAGCGT GAGCCTGGCC CGGGACGGCG CCGACGGTCT GCACCTGGCG
CTGGAGTTCG ACTTCGACGT GATCGTGCTG GACGTGATGA TGCCGAAAAT GGATGGCTGG
GAAGTCCTGC GCCGGCTGCG TAAGGAAACC GACACCCCGG TGCTGTTTCT CACCGCCCGC
GATGACATCG CCGACCGGGT CAAGGGGCTT GAACTGGGCG CTGACGACTA CCTGATCAAG
CCGTTTTCCT TCGCCGAACT GGTGGCGCGC CTGCGCACCC TGACCCGGCG CGGGCCGATC
CATGAAGAAG AGCAATTGCA GGTGGCCGAT CTGCAGATCG ATGTGCTCAA GCGTCGGGTC
ACCCGGGCCG GCAACCGGAT CACCCTGACC AACAAGGAAT TCGCCCTGCT GCAACTGTTT
GCCGCCCACA CCGGGCAAGT GCTGTCGCGT TCGCTGATCG CCTCGCGGGT GTGGGACATG
AATTTCGACA GTGACACCAA TGTGGTCGAT GTCGCCGTGC GCCGCCTGCG GGCGAAGATC
GACGATCCGT TCCCGCTCAA GCTGATCCAC AGCGTGCGCG GCATCGGCTA CCGCTTCGAT
ACCCAACCAT GA
 
Protein sequence
MNILVVEDEP KAGNYLLNGL QELGYSVSLA RDGADGLHLA LEFDFDVIVL DVMMPKMDGW 
EVLRRLRKET DTPVLFLTAR DDIADRVKGL ELGADDYLIK PFSFAELVAR LRTLTRRGPI
HEEEQLQVAD LQIDVLKRRV TRAGNRITLT NKEFALLQLF AAHTGQVLSR SLIASRVWDM
NFDSDTNVVD VAVRRLRAKI DDPFPLKLIH SVRGIGYRFD TQP