More than 300 homologs were found in PanDaTox collection
for query gene Suden_1951 on replicon NC_007575
Organism: Sulfurimonas denitrificans DSM 1251



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007575  Suden_1951  response regulator receiver domain-containing protein  100 
 
 
135 aa  270  5.000000000000001e-72  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.103033  n/a   
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  30.83 
 
 
352 aa  81.3  0.000000000000004  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007498  Pcar_2709  two component signal transduction response regulator  32.76 
 
 
429 aa  76.3  0.0000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_2285  response regulator receiver  32.2 
 
 
130 aa  74.3  0.0000000000005  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000158247  n/a   
 
 
-
 
NC_007955  Mbur_0841  response regulator receiver  30.51 
 
 
135 aa  71.6  0.000000000003  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_011832  Mpal_1773  response regulator receiver sensor signal transduction histidine kinase  31.15 
 
 
386 aa  70.5  0.000000000007  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_0455  response regulator receiver domain-containing protein  28.07 
 
 
238 aa  70.5  0.000000000007  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.21261 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  30.89 
 
 
197 aa  70.1  0.000000000009  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_013730  Slin_3896  two component transcriptional regulator, LytTR family  33.87 
 
 
245 aa  68.9  0.00000000002  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.356034 
 
 
-
 
NC_013132  Cpin_0268  sigma54 specific transcriptional regulator, Fis family  34.86 
 
 
651 aa  68.6  0.00000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_2645  putative PAS/PAC sensor protein  27.1 
 
 
336 aa  67.8  0.00000000005  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008554  Sfum_2639  multi-sensor hybrid histidine kinase  29.46 
 
 
817 aa  67.8  0.00000000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1114  response regulator receiver sensor signal transduction histidine kinase  33.93 
 
 
373 aa  66.6  0.0000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_2117  putative PAS/PAC sensor protein  32.14 
 
 
257 aa  66.2  0.0000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_0048  putative PAS/PAC sensor protein  28.81 
 
 
255 aa  66.2  0.0000000001  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_1813  response regulator receiver protein  29.51 
 
 
316 aa  66.6  0.0000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.445517  normal  0.445863 
 
 
-
 
NC_009483  Gura_1730  multi-sensor signal transduction histidine kinase  27.73 
 
 
591 aa  66.2  0.0000000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.319599  n/a   
 
 
-
 
NC_010623  Bphy_4529  multi-sensor hybrid histidine kinase  25.41 
 
 
989 aa  66.2  0.0000000001  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  29.2 
 
 
196 aa  66.2  0.0000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_0900  response regulator receiver protein  30.36 
 
 
126 aa  65.5  0.0000000002  Candidatus Methanoregula boonei 6A8  Archaea  normal  hitchhiker  0.000110071 
 
 
-
 
NC_007355  Mbar_A3448  putative transcriptional regulator  28.81 
 
 
143 aa  65.5  0.0000000002  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.132297  normal  0.0606491 
 
 
-
 
NC_007575  Suden_1012  response regulator receiver domain-containing protein  33.96 
 
 
109 aa  65.9  0.0000000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0439  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  29.91 
 
 
455 aa  65.9  0.0000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.444664 
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  29.46 
 
 
196 aa  65.5  0.0000000002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0985  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  29.66 
 
 
704 aa  65.1  0.0000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000494124  n/a   
 
 
-
 
NC_007796  Mhun_2686  putative PAS/PAC sensor protein  29.84 
 
 
337 aa  65.1  0.0000000003  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.209027 
 
 
-
 
NC_007575  Suden_0616  two component transcriptional regulator  34.82 
 
 
249 aa  64.7  0.0000000004  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_2212  response regulator receiver protein  30.51 
 
 
122 aa  64.7  0.0000000004  Methanosphaerula palustris E1-9c  Archaea  normal  0.092497  normal  0.290386 
 
 
-
 
NC_013132  Cpin_0115  two component, sigma54 specific, transcriptional regulator, Fis family  31.53 
 
 
481 aa  64.3  0.0000000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1528  response regulator receiver protein  28.81 
 
 
450 aa  64.3  0.0000000005  Candidatus Methanoregula boonei 6A8  Archaea  hitchhiker  0.00374994  normal  0.77554 
 
 
-
 
NC_009712  Mboo_1808  putative PAS/PAC sensor protein  31.2 
 
 
603 aa  63.9  0.0000000007  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.268482 
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  28.43 
 
 
198 aa  63.9  0.0000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_011884  Cyan7425_3178  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  27.19 
 
 
426 aa  63.9  0.0000000008  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0428  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  29.91 
 
 
455 aa  63.5  0.000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007796  Mhun_2637  putative PAS/PAC sensor protein  27.83 
 
 
461 aa  63.2  0.000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_010551  BamMC406_1235  multi-sensor hybrid histidine kinase  24.59 
 
 
989 aa  63.5  0.000000001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.172784  normal 
 
 
-
 
NC_011884  Cyan7425_2337  signal transduction histidine kinase  30.19 
 
 
352 aa  63.5  0.000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  27.73 
 
 
200 aa  63.2  0.000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1242  multi-sensor signal transduction histidine kinase  30.36 
 
 
472 aa  62.4  0.000000002  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.41521  normal 
 
 
-
 
NC_013132  Cpin_1348  two component, sigma54 specific, transcriptional regulator, Fis family  30.63 
 
 
461 aa  62.8  0.000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0066  response regulator receiver sensor signal transduction histidine kinase  29.2 
 
 
377 aa  62  0.000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.359193  normal  0.0132857 
 
 
-
 
NC_009712  Mboo_0913  response regulator receiver protein  28.07 
 
 
124 aa  62  0.000000002  Candidatus Methanoregula boonei 6A8  Archaea  normal  hitchhiker  0.0000000115879 
 
 
-
 
NC_007519  Dde_1631  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  27.43 
 
 
561 aa  62.8  0.000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.608678  n/a   
 
 
-
 
NC_009712  Mboo_1488  response regulator receiver protein  25.62 
 
 
450 aa  62.8  0.000000002  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.379239 
 
 
-
 
NC_007796  Mhun_3039  response regulator receiver sensor signal transduction histidine kinase  28.57 
 
 
355 aa  62.4  0.000000002  Methanospirillum hungatei JF-1  Archaea  normal  0.610599  normal 
 
 
-
 
NC_007955  Mbur_2294  response regulator receiver  26.79 
 
 
134 aa  62.4  0.000000002  Methanococcoides burtonii DSM 6242  Archaea  normal  0.371138  n/a   
 
 
-
 
NC_009712  Mboo_1497  putative PAS/PAC sensor protein  31.48 
 
 
380 aa  61.6  0.000000003  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.506851  normal  0.137069 
 
 
-
 
NC_011884  Cyan7425_4302  signal transduction histidine kinase  31.07 
 
 
343 aa  61.6  0.000000003  Cyanothece sp. PCC 7425  Bacteria  normal  0.219335  normal  0.321802 
 
 
-
 
NC_009430  Rsph17025_4165  hypothetical protein  25.66 
 
 
153 aa  61.6  0.000000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4307  sigma54 specific transcriptional regulator, Fis family  29.06 
 
 
635 aa  61.6  0.000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.056389 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  26.89 
 
 
199 aa  61.2  0.000000004  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  28.57 
 
 
194 aa  61.6  0.000000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_013037  Dfer_5460  sigma54 specific transcriptional regulator, Fis family  29.31 
 
 
650 aa  61.2  0.000000005  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.665291  normal  0.225769 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  27.64 
 
 
205 aa  61.2  0.000000005  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  26.45 
 
 
204 aa  60.8  0.000000007  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_2085  putative two component, sigma54 specific, transcriptional regulator, Fis family  28.83 
 
 
457 aa  60.5  0.000000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  27.05 
 
 
199 aa  60.8  0.000000007  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  26.47 
 
 
207 aa  60.5  0.000000008  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_013730  Slin_3427  two component transcriptional regulator, LytTR family  27.43 
 
 
256 aa  60.1  0.000000009  Spirosoma linguale DSM 74  Bacteria  normal  0.239231  normal 
 
 
-
 
NC_007355  Mbar_A2510  transcriptional regulator  30.4 
 
 
157 aa  60.1  0.00000001  Methanosarcina barkeri str. Fusaro  Archaea  decreased coverage  0.000843612  normal  0.354799 
 
 
-
 
NC_013037  Dfer_5458  putative two component, sigma54 specific, transcriptional regulator, Fis family  28.07 
 
 
582 aa  60.1  0.00000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.336827 
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  24.39 
 
 
213 aa  59.7  0.00000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  26.19 
 
 
195 aa  59.3  0.00000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_007955  Mbur_1557  response regulator receiver  30.36 
 
 
131 aa  58.9  0.00000002  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000000412225  n/a   
 
 
-
 
NC_009712  Mboo_1311  putative PAS/PAC sensor protein  26.36 
 
 
340 aa  58.5  0.00000003  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.187179 
 
 
-
 
NC_013730  Slin_3671  Sigma 54 interacting domain protein  28.18 
 
 
657 aa  58.2  0.00000004  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_3008  multi-sensor hybrid histidine kinase  26.5 
 
 
953 aa  57.8  0.00000005  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0739  putative response regulator  24.79 
 
 
261 aa  57.8  0.00000005  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
NC_011898  Ccel_0147  two component transcriptional regulator, AraC family  28.95 
 
 
525 aa  57.8  0.00000006  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  26.02 
 
 
227 aa  57.4  0.00000007  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_007948  Bpro_3511  response regulator receiver sensor signal transduction histidine kinase  22.32 
 
 
384 aa  57.4  0.00000007  Polaromonas sp. JS666  Bacteria  normal  normal  0.253652 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  26.21 
 
 
210 aa  57  0.00000008  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  23.68 
 
 
220 aa  57  0.00000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  26.21 
 
 
210 aa  57  0.00000008  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  26.21 
 
 
210 aa  57  0.00000008  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  25.44 
 
 
214 aa  57  0.00000009  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_009712  Mboo_1358  putative PAS/PAC sensor protein  29.63 
 
 
404 aa  57  0.00000009  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.873442  normal  0.0258422 
 
 
-
 
NC_014230  CA2559_08681  transcriptional regulator  31.86 
 
 
240 aa  56.6  0.0000001  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.803849  n/a   
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  26.02 
 
 
207 aa  56.6  0.0000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  25.21 
 
 
636 aa  56.6  0.0000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_013173  Dbac_0866  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  28.71 
 
 
701 aa  56.2  0.0000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.711392  n/a   
 
 
-
 
NC_007908  Rfer_0893  response regulator receiver sensor signal transduction histidine kinase  25 
 
 
359 aa  56.6  0.0000001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_2032  response regulator receiver protein  26.19 
 
 
387 aa  56.2  0.0000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.0686114 
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  23.58 
 
 
229 aa  56.6  0.0000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  26.5 
 
 
197 aa  56.2  0.0000001  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  27.97 
 
 
194 aa  55.5  0.0000002  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_007490  RSP_4195  response regulator receiver protein  23.68 
 
 
154 aa  55.1  0.0000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.81513  n/a   
 
 
-
 
NC_009712  Mboo_1807  putative PAS/PAC sensor protein  25.42 
 
 
258 aa  55.1  0.0000003  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.254511 
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  26.4 
 
 
191 aa  55.1  0.0000003  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_011769  DvMF_1460  putative PAS/PAC sensor protein  24.58 
 
 
474 aa  55.1  0.0000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.81808 
 
 
-
 
NC_013132  Cpin_4365  two component, sigma54 specific, transcriptional regulator, Fis family  24.77 
 
 
471 aa  54.3  0.0000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.231326 
 
 
-
 
NC_013411  GYMC61_2788  response regulator receiver and unknown domain protein  30.77 
 
 
230 aa  54.3  0.0000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  26.02 
 
 
200 aa  54.3  0.0000006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2692  two component transcriptional regulator, winged helix family  29.03 
 
 
229 aa  53.9  0.0000007  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  25 
 
 
247 aa  53.9  0.0000007  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01100  sensory box/GGDEF family protein  29.41 
 
 
798 aa  53.9  0.0000007  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3521  two-component response regulator  28.18 
 
 
249 aa  53.9  0.0000008  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0434  putative PAS/PAC sensor protein  26.17 
 
 
458 aa  53.9  0.0000008  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_2576  response regulator receiver domain-containing protein  27.12 
 
 
122 aa  53.5  0.0000009  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008751  Dvul_2282  histidine kinase  24.19 
 
 
667 aa  53.5  0.0000009  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
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