| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5458 |
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| Symbol | |
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| ID | 8229069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6583549 |
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| End bp | 6585297 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644933301 |
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| Product | putative two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003089814 |
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| Protein GI | 255039193 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.336827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGA AGATACTTAT CGTGGAGGAT TTTTTTGTAG AAGCAAACCA TCTCAGAATC
CTGCTCACGC GCGCAGGATA CGAGGTGACG GGTATCGCGA GGACGTTCGA AAGTGCCGAA
GAAGCCATCA GGCAGGATCA CCCGGAAATC GTTTTGGTGG ATATTTTTCT GGCAGGACAA
AAAACAGGCG TAGACCTGGC CAGGTTGCTG AACCGCCAGA ACATTCCGTT CATTTACTTG
TCCGCCAACT CCAATGAGGA AGTACTCAAA ACCGCCCGGG AAACCGGCCC CAGCGGGTTT
GTCGTGAAGC CATTCCGGGA AAAGGACTTG CTGGCGGCTA TCGGCATTGC GCGCTATCTT
CACGAAAGCA GCAGGGAGGC GCTTTGGCGG AAAGAGGCCG CATTCACCGG CGAACTCGAC
CGCCTGGCGG GCGCCCGCCG CCCGTGGCCG GAGCGGATGC TGTGCCTGGT AAGGGCATTG
CAGCAATTTA TTTCGTTCGA CTATGTGGCT GTCGGTTTTA TCGGGCCAGT TTATATGCCA
TTTAATGCGT TGCACTTCCT GCGGACCGGT TTCGATGAAT ACCAGGTTAT GGATTCGGAA
GGGTTTCAAA CCGTGAGCAG AATTAATCCG GCCAGGATGG TGGCCAGCAT GGCTGCGATT
AAGCTCAGGA CGAGCCCGGT GTTTTTCAAT GCGGTCCAGT TTCAGATCGC ATGCCAGGAA
AGCGGCATCC GTTCGCTGGT CGGCAAGACT TTTGATATGC ATTCCAACCT GCTTTTCCCT
TTGCCGAAGA TTTCGTTGGA CGGCAGATAT TTCTTTTTGT CATTATATAG TGGTCGTAAT
GATGCTTTTA ACGAGCGGCA CCTTGAACTG TGCCGGAAGG TGCAGCCCGC CTTGCAGCAT
GCGGTGGAGG AAATGACCCG GCATGTGATG CCCGGTTTCC CTCAGGTGCG GCTTGACGAG
GGTATTGAAC TGATCTCCAA TAAAGTCCCG ATTCCCGGGC CATTGGGCGC GATGATCGGC
GAAAGTCACC TGTTTCTGCA CGTGCTGGAC CTGGCGGTGG CTTTTGCGGC GACCGACTCG
TCGGTGCTGA TCCGCGGCGA ACGCGGGACC GGTAAGGAGC AGGTCGCCGG GGGCATTCAT
GCATTGTCGG CCAGGAGTGA CGGGCCTTTC ATCAAGGTGA ATTGCGCGGG CTTCTCGGCC
GGGTCGATGG AGGGAGAGCT GTTCGGATTT GAAAACGGTG GGCCCGGCAA TGCGCGCACC
GGCCGTTTCG GACAGGCCGA GGGCGGTACC CTGTTTTTGG ATGAAATCGG GGAAATGCCT
TTTGAAATCC AGCTCAAACT GCTCAATGTC CTGCAAAGGC ACGAAATGGA ACGGGTAGGA
GGGCGCCAGC CGGTGCGTGT GGATGTACGC GTGATTGTCG CCACCAGCCG CGACCTCGAA
AAAGAGATCG CCGAAGGCAG GTTCAGGCTC GATTTGTATT ACCGGCTGAA TGCATGTTGC
ATCCGGCTGC CGGCTTTGCG CGAACGGATC GACGATATCG AGTTGATCGC AACCCATTTT
TTGGAATATT TTGCAGAAAA ATCGGGCAGA GGGCATGCAC TGCGGTTCTC GGAAAAGAGC
ATCCGGATGC TGAAAGAATA CGATTGGCCG GGCAATGTAG CGGAGCTGAT GGATGCGATA
GAAACCTGTG TCTTATTTGC CAGAACCGAG ATTGTCGACG ACATTAAACT ACCTTCCAGA
AAATCTTAG
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| Protein sequence | MKQKILIVED FFVEANHLRI LLTRAGYEVT GIARTFESAE EAIRQDHPEI VLVDIFLAGQ
KTGVDLARLL NRQNIPFIYL SANSNEEVLK TARETGPSGF VVKPFREKDL LAAIGIARYL
HESSREALWR KEAAFTGELD RLAGARRPWP ERMLCLVRAL QQFISFDYVA VGFIGPVYMP
FNALHFLRTG FDEYQVMDSE GFQTVSRINP ARMVASMAAI KLRTSPVFFN AVQFQIACQE
SGIRSLVGKT FDMHSNLLFP LPKISLDGRY FFLSLYSGRN DAFNERHLEL CRKVQPALQH
AVEEMTRHVM PGFPQVRLDE GIELISNKVP IPGPLGAMIG ESHLFLHVLD LAVAFAATDS
SVLIRGERGT GKEQVAGGIH ALSARSDGPF IKVNCAGFSA GSMEGELFGF ENGGPGNART
GRFGQAEGGT LFLDEIGEMP FEIQLKLLNV LQRHEMERVG GRQPVRVDVR VIVATSRDLE
KEIAEGRFRL DLYYRLNACC IRLPALRERI DDIELIATHF LEYFAEKSGR GHALRFSEKS
IRMLKEYDWP GNVAELMDAI ETCVLFARTE IVDDIKLPSR KS
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