More than 300 homologs were found in PanDaTox collection
for query gene Sputcn32_3349 on replicon NC_009438
Organism: Shewanella putrefaciens CN-32



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009438  Sputcn32_3349  short-chain dehydrogenase/reductase SDR  100 
 
 
225 aa  459  9.999999999999999e-129  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3982  short-chain dehydrogenase/reductase SDR  85.71 
 
 
225 aa  400  1e-111  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3800  short-chain dehydrogenase/reductase SDR  86.16 
 
 
225 aa  401  1e-111  Shewanella baltica OS223  Bacteria  hitchhiker  0.0000125845  normal 
 
 
-
 
NC_009665  Shew185_3856  short-chain dehydrogenase/reductase SDR  85.27 
 
 
225 aa  399  9.999999999999999e-111  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0468  short-chain dehydrogenase/reductase SDR  84.82 
 
 
225 aa  387  1e-106  Shewanella baltica OS155  Bacteria  decreased coverage  0.00000583805  n/a   
 
 
-
 
NC_008577  Shewana3_0509  short-chain dehydrogenase/reductase SDR  82.22 
 
 
225 aa  359  2e-98  Shewanella sp. ANA-3  Bacteria  normal  0.832516  normal 
 
 
-
 
NC_004347  SO_0510  short chain dehydrogenase/reductase family oxidoreductase  81.33 
 
 
225 aa  354  5.999999999999999e-97  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0509  short-chain dehydrogenase/reductase SDR  81.78 
 
 
225 aa  350  8.999999999999999e-96  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3522  short-chain dehydrogenase/reductase SDR  81.78 
 
 
225 aa  350  8.999999999999999e-96  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2183  putative short-chain dehydrogenase  67.11 
 
 
221 aa  317  1e-85  Shewanella sediminis HAW-EB3  Bacteria  normal  0.766621  normal 
 
 
-
 
NC_009901  Spea_0532  short-chain dehydrogenase/reductase SDR  66.67 
 
 
220 aa  305  4.0000000000000004e-82  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00000466004  n/a   
 
 
-
 
NC_009092  Shew_0706  short-chain dehydrogenase/reductase SDR  66.96 
 
 
225 aa  301  6.000000000000001e-81  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2454  short-chain dehydrogenase/reductase SDR  62.22 
 
 
225 aa  293  2e-78  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002433  putative short-chain dehydrogenase  55.36 
 
 
221 aa  247  1e-64  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03631  hypothetical protein  55.36 
 
 
221 aa  245  4.9999999999999997e-64  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_1876  short-chain dehydrogenase/reductase SDR  57.33 
 
 
226 aa  241  7.999999999999999e-63  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1668  short-chain dehydrogenase/reductase SDR  33.7 
 
 
251 aa  92.4  4e-18  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  30.22 
 
 
265 aa  84.7  0.000000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  32.83 
 
 
270 aa  84  0.000000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_013131  Caci_3280  short-chain dehydrogenase/reductase SDR  29.56 
 
 
232 aa  83.6  0.000000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.798057  normal 
 
 
-
 
NC_008726  Mvan_6051  short chain dehydrogenase  28 
 
 
221 aa  83.6  0.000000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0202908  normal  0.993323 
 
 
-
 
NC_013132  Cpin_4835  short-chain dehydrogenase/reductase SDR  28.8 
 
 
273 aa  81.3  0.00000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.000000227026 
 
 
-
 
NC_008148  Rxyl_3000  short-chain dehydrogenase/reductase SDR  31.48 
 
 
241 aa  81.3  0.00000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010627  Bphy_7637  short-chain dehydrogenase/reductase SDR  26.03 
 
 
251 aa  81.3  0.00000000000001  Burkholderia phymatum STM815  Bacteria  normal  normal  0.897824 
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  30.22 
 
 
286 aa  80.9  0.00000000000002  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  29.02 
 
 
266 aa  80.1  0.00000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  30.46 
 
 
263 aa  80.1  0.00000000000003  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  34.43 
 
 
279 aa  79.3  0.00000000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  31.61 
 
 
269 aa  79.3  0.00000000000004  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_013501  Rmar_2639  short-chain dehydrogenase/reductase SDR  29.32 
 
 
238 aa  79  0.00000000000005  Rhodothermus marinus DSM 4252  Bacteria  normal  0.37123  n/a   
 
 
-
 
NC_010803  Clim_2370  short-chain dehydrogenase/reductase SDR  25.44 
 
 
253 aa  79  0.00000000000005  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2206  short-chain dehydrogenase/reductase SDR  27.83 
 
 
261 aa  78.6  0.00000000000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0587036  normal  0.882414 
 
 
-
 
NC_009338  Mflv_0854  short chain dehydrogenase  27.56 
 
 
225 aa  78.6  0.00000000000007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0159157 
 
 
-
 
NC_014165  Tbis_0964  short-chain dehydrogenase/reductase SDR  27.31 
 
 
227 aa  78.2  0.0000000000001  Thermobispora bispora DSM 43833  Bacteria  normal  0.0180181  normal  0.277757 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  29.46 
 
 
266 aa  77.8  0.0000000000001  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1596  short chain dehydrogenase  28.17 
 
 
245 aa  78.2  0.0000000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.184756 
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  29.95 
 
 
321 aa  77.8  0.0000000000001  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  28.44 
 
 
270 aa  77.4  0.0000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0016  short-chain dehydrogenase/reductase SDR  32.61 
 
 
231 aa  77  0.0000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  28.44 
 
 
270 aa  77.4  0.0000000000002  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  30.11 
 
 
261 aa  77.4  0.0000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008701  Pisl_1529  short-chain dehydrogenase/reductase SDR  30.56 
 
 
265 aa  77  0.0000000000002  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.0206025  normal  0.910086 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  31.03 
 
 
273 aa  77  0.0000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_0363  short-chain dehydrogenase/reductase SDR  28.88 
 
 
281 aa  76.6  0.0000000000003  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4285  short chain dehydrogenase/reductase family oxidoreductase  32.4 
 
 
249 aa  76.3  0.0000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_18610  short chain dehydrogenase  32.04 
 
 
263 aa  75.9  0.0000000000004  Azotobacter vinelandii DJ  Bacteria  normal  0.56588  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  27.52 
 
 
264 aa  75.9  0.0000000000004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_010816  BLD_0416  short-chain alcohol dehydrogenase  28.32 
 
 
235 aa  75.9  0.0000000000004  Bifidobacterium longum DJO10A  Bacteria  normal  0.279959  n/a   
 
 
-
 
NC_014158  Tpau_3139  short-chain dehydrogenase/reductase SDR  27.23 
 
 
251 aa  75.9  0.0000000000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.295469  n/a   
 
 
-
 
NC_013730  Slin_4558  short-chain dehydrogenase/reductase SDR  31.13 
 
 
240 aa  75.5  0.0000000000005  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00293136  normal 
 
 
-
 
NC_010524  Lcho_0185  short chain dehydrogenase  32.45 
 
 
267 aa  75.9  0.0000000000005  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007514  Cag_0693  sepiapterin reductase  26.94 
 
 
241 aa  75.5  0.0000000000006  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.101959  n/a   
 
 
-
 
NC_010725  Mpop_1331  short-chain dehydrogenase/reductase SDR  30 
 
 
332 aa  75.5  0.0000000000006  Methylobacterium populi BJ001  Bacteria  normal  0.261589  normal  0.281891 
 
 
-
 
NC_009714  CHAB381_0075  3-oxoacyl-[acyl-carrier protein] reductase  30.19 
 
 
212 aa  75.5  0.0000000000007  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  31.38 
 
 
271 aa  75.5  0.0000000000007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0767  short-chain dehydrogenase/reductase SDR  30 
 
 
330 aa  75.1  0.0000000000009  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.415615 
 
 
-
 
NC_013159  Svir_39280  short chain dehydrogenase  25.11 
 
 
230 aa  75.1  0.0000000000009  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  27.52 
 
 
264 aa  75.1  0.0000000000009  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2840  short chain dehydrogenase  28.49 
 
 
302 aa  74.7  0.0000000000009  Nocardioides sp. JS614  Bacteria  normal  0.28747  n/a   
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  29.02 
 
 
266 aa  74.7  0.000000000001  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_009972  Haur_1420  short-chain dehydrogenase/reductase SDR  27.75 
 
 
280 aa  74.7  0.000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  28.76 
 
 
263 aa  74.3  0.000000000001  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  29.33 
 
 
264 aa  74.3  0.000000000001  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_011725  BCB4264_A0885  oxidoreductase, short-chain dehydrogenase/reductase family  30.5 
 
 
256 aa  74.7  0.000000000001  Bacillus cereus B4264  Bacteria  normal  0.0698186  n/a   
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  28.96 
 
 
266 aa  74.7  0.000000000001  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_013730  Slin_5157  short-chain dehydrogenase/reductase SDR  26.52 
 
 
224 aa  74.3  0.000000000002  Spirosoma linguale DSM 74  Bacteria  normal  0.0425184  normal  0.202978 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  30.05 
 
 
266 aa  73.9  0.000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_0660  short-chain dehydrogenase/reductase SDR  27.89 
 
 
284 aa  73.6  0.000000000002  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  28.96 
 
 
266 aa  73.6  0.000000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  28.51 
 
 
266 aa  73.6  0.000000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_013131  Caci_5627  short-chain dehydrogenase/reductase SDR  33.51 
 
 
282 aa  73.9  0.000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.193827 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  28.96 
 
 
281 aa  73.9  0.000000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008312  Tery_3313  short-chain dehydrogenase/reductase SDR  29.44 
 
 
281 aa  74.3  0.000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  0.320524  normal  0.08809 
 
 
-
 
NC_009523  RoseRS_0388  short-chain dehydrogenase/reductase SDR  28.72 
 
 
269 aa  73.9  0.000000000002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.14599 
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  28.96 
 
 
281 aa  73.9  0.000000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_013132  Cpin_6402  short-chain dehydrogenase/reductase SDR  29.27 
 
 
277 aa  73.9  0.000000000002  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000182624  normal 
 
 
-
 
NC_004347  SO_4141  short chain dehydrogenase/reductase family oxidoreductase  28.72 
 
 
243 aa  73.6  0.000000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  30.16 
 
 
269 aa  73.2  0.000000000003  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  29.32 
 
 
264 aa  73.2  0.000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_011772  BCG9842_B4450  oxidoreductase  30.5 
 
 
256 aa  73.2  0.000000000003  Bacillus cereus G9842  Bacteria  normal  0.0191717  normal  0.678808 
 
 
-
 
NC_011726  PCC8801_4281  short-chain dehydrogenase/reductase SDR  24.67 
 
 
236 aa  73.2  0.000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4341  short-chain dehydrogenase/reductase SDR  24.67 
 
 
236 aa  73.2  0.000000000003  Cyanothece sp. PCC 8802  Bacteria  normal  0.157663  normal 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  27.06 
 
 
264 aa  72.8  0.000000000004  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  27.06 
 
 
264 aa  72.8  0.000000000004  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_010172  Mext_1019  short-chain dehydrogenase/reductase SDR  29.52 
 
 
330 aa  72.8  0.000000000004  Methylobacterium extorquens PA1  Bacteria  normal  0.0961773  normal 
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  27.06 
 
 
264 aa  72.8  0.000000000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0348  short-chain dehydrogenase/reductase SDR  26.75 
 
 
280 aa  72.8  0.000000000004  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  27.88 
 
 
271 aa  72.8  0.000000000004  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2666  short chain dehydrogenase  31.55 
 
 
265 aa  72.8  0.000000000004  Methylibium petroleiphilum PM1  Bacteria  normal  0.144956  normal 
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  27.06 
 
 
264 aa  72.8  0.000000000004  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  27.06 
 
 
264 aa  72.8  0.000000000004  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_4667  Short-chain dehydrogenase/reductase SDR  25.65 
 
 
234 aa  72.4  0.000000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3945  short-chain dehydrogenase/reductase SDR  33.15 
 
 
264 aa  72.4  0.000000000005  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3687  short-chain dehydrogenase/reductase SDR  27.96 
 
 
243 aa  72.4  0.000000000005  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  27.06 
 
 
264 aa  72  0.000000000006  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5500  short-chain dehydrogenase/reductase SDR  27.87 
 
 
250 aa  72.4  0.000000000006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_1903  Short-chain dehydrogenase/reductase SDR  29.55 
 
 
242 aa  72.4  0.000000000006  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_2023  oxidoreductase  29.34 
 
 
253 aa  72  0.000000000006  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  27.88 
 
 
262 aa  72  0.000000000007  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_008740  Maqu_0292  short chain dehydrogenase  33.09 
 
 
260 aa  72  0.000000000007  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
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