Gene BLD_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0416 
Symbol 
ID6364179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp495099 
End bp495806 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content61% 
IMG OID642679567 
Productshort-chain alcohol dehydrogenase 
Protein accessionYP_001954360 
Protein GI189439279 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.279959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACCA CAACAGGTAA GAAAATCGCC ATCGTCACCG GCAGCGCGCT GGGCTTGGGC 
TACGAGCTCG CCAGCCAGCT CATCGCCAAC GGCTGGCTGG TGGCCGGTGT CGACTTCAAT
GCCGAACGTC AGGCCGAACT GACCGCGCAG TGGCCCGATG ACTCCTACCG CGCCTACGTC
GGCGACATCA CCGACGAAGC GTTCGTGAAG GAATCCGTGG CGGATATCGC CACGCTCGGC
CACATCGATT TGCTCATCAA CAACGCCGGC CAGCCTTCGT TCAAGGTGCC CACCGCCTAC
GAGGCCGCCG ACGTCGACAA ATGTCTCAAG GGACTCAAAG GCATGATTCT GTGGACGGTG
GAAACCCTCA AGGCCTGCGG CGAGCAGAAC GTGAAAATCG CCCAGATTAT GAGCACCGCC
GCCACACGCG GCAACGCGAA CGAAAGCGTG TACTGCGCCA CCAAGTGGGG TGAGAAAGGC
TACACCAAGA GCCTGCAGGC CGCATACAAG GGCACCAGTG TCAAGGTGGT CGCCGTCTAT
CCGGGCGGCA TTGATACCGC TTTCTACCGT GACAGTCGCG ACTACGTCTC CGAGGCCAAG
CAGCACACCT TCATGCAGCC CGGCCCGCTG GCCGAAGTCA TCCTCTTCAA CCTGATCAAC
GAGGCCAACC TCACCGTCAC CGACATCGAG ATCAACCGCA ACAGCTGA
 
Protein sequence
MPTTTGKKIA IVTGSALGLG YELASQLIAN GWLVAGVDFN AERQAELTAQ WPDDSYRAYV 
GDITDEAFVK ESVADIATLG HIDLLINNAG QPSFKVPTAY EAADVDKCLK GLKGMILWTV
ETLKACGEQN VKIAQIMSTA ATRGNANESV YCATKWGEKG YTKSLQAAYK GTSVKVVAVY
PGGIDTAFYR DSRDYVSEAK QHTFMQPGPL AEVILFNLIN EANLTVTDIE INRNS