| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2183 |
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| Symbol | |
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| ID | 5613379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2640602 |
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| End bp | 2641267 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640933087 |
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| Product | putative short-chain dehydrogenase |
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| Protein accession | YP_001473920 |
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| Protein GI | 157375320 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.766621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGTCA TTACCGGTGC CAGTAGCGGA CTAGGGGCTG CCCTGGCTAA GCTGTACAGC
GAAGAGGGGG CCGAGCTGTT AATCTCTGGC CGTAACGAAC AACGTTTGCG TGAAGTCTCA
GATCCTTTAA GTGATAAAGT CCAGTCTAAG ACGGCGAACC TGAGTCGTGC CGACGATATA
AAAGCCCTGT TTGATACCTG CCTACACACG CCGAAATCCA TCATTCACTG CGCCGGTAGC
GGTTATTTTG GTGCCCTGGA AGATCAAGAA CCCGATGCTA TTAACGCTTT GATAGAAAAC
AATGTAACGT CGGCAATCAT GCTTTTACGT GAAGCGGTGA AGCGCTACAA AGAGCAGGCT
GTGACGGTTG TGATTGTTAT GTCGACGGCG GCTCTGGCGG CTAAGGCGGG TGAGTCGACC
TACTGTGCGG CTAAATGGGC GGTACGGGGA TTGGTTGAAT CTGTACGCCT GGAGCTCAAA
GGAAGCCCCA TGAAGCTAAT TGCGGTTTAC CCCGGGGGAA TGGCAACGGA ATTTTGGCCC
TCGAGTGGAA AGTCATTAGA TACATCCGGC TTTATGAGCG CAGATGAAGC GGCGACCATG
CTTAAGCAAG CGCTGGTTGG AACCGAGCAT GGCTATGTGT CTGATATTAC GATTGCCCGG
GGTTAA
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| Protein sequence | MIVITGASSG LGAALAKLYS EEGAELLISG RNEQRLREVS DPLSDKVQSK TANLSRADDI
KALFDTCLHT PKSIIHCAGS GYFGALEDQE PDAINALIEN NVTSAIMLLR EAVKRYKEQA
VTVVIVMSTA ALAAKAGEST YCAAKWAVRG LVESVRLELK GSPMKLIAVY PGGMATEFWP
SSGKSLDTSG FMSADEAATM LKQALVGTEH GYVSDITIAR G
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