| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1876 |
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| Symbol | |
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| ID | 4018364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2201637 |
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| End bp | 2202317 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955897 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_562882 |
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| Protein GI | 91793231 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTAA TTACCGGTGC AAGCAGTGGC CTAGGAGCGG CGCTTTCCCA TGAATATGCT
GCCGATGGCC AGCAGTTATA CCTTACCGGC CGTGATGAGG CCAAGCTTAG TCAAGTTGTC
GACGACGTGA GCCGTATGAA TAAAGGCGTG ACTATCCAAT CAAAAAGCGC AGTGCTCAAT
GATCCCAGTA GTGTCACGGC CTTGTTAGAC AGCCTGCCCC ATGCGCCTAA GACAGTGATC
CACTGCGCAG GCAGCGGCTA TTTTGGTGCA TTGGCCGAGC AAACCAGTGA AGGGATCATT
AATCTGGTGA ATAACAACCT CACCGCAACC TTGCTGTTAT TAAGTGAGCT TGTCAGGCGC
TACCAAGATG AGCCAACACG GGTGGTGATT GTATTATCCA CAGCTGCGCT ACAAGCAAAA
GCTGGTGAGA GCAGCTATTG CGCGGTGAAA TGGGCCATTA AAGGATTAAT AGAATCTTTA
CGTCTCGAAC TTAAAGGTAA ACCTATGTCG CTGATTGCCG TTTATCCTGG CGGGATGGCG
ACAGAATTTT GGCAAACCAG CGGCAAAAAG CTTAATACCA CAGGTTTTAT GAGTGCGGCA
GAAGCGGCGT CGATGATAAA GCAAGCACTG CTGAGTAGCG AACATGGCTA TATTTCTGAT
GTCACCATTA ATCGTCGATA A
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| Protein sequence | MYLITGASSG LGAALSHEYA ADGQQLYLTG RDEAKLSQVV DDVSRMNKGV TIQSKSAVLN
DPSSVTALLD SLPHAPKTVI HCAGSGYFGA LAEQTSEGII NLVNNNLTAT LLLLSELVRR
YQDEPTRVVI VLSTAALQAK AGESSYCAVK WAIKGLIESL RLELKGKPMS LIAVYPGGMA
TEFWQTSGKK LNTTGFMSAA EAASMIKQAL LSSEHGYISD VTINRR
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