Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_4341 |
Symbol | |
ID | 8393693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 4491339 |
End bp | 4492049 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644982251 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003139962 |
Protein GI | 257062074 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.157663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGATA AAGTTATTCT GATTGTGGGG GCTACGGGTG GTATTGGCTC AACGTTAGGG CAAAAATTGT CTAACGCAGG AGCCAAGTTG ATTTTAGCAG GACGTAATCA TCAAAAATTA ACGGATTTAA GCGATCAATT AGCGCAAAAA ACTTCCGTTA TGGCAGTTCC GACGGATATT ACCAACCCCC AACAGGTAGA AACTTTGATG GCAAAAGCTT TAGCACAATT TGGCCGCATT GATGTTCTGG TTAATGCTGC TGGAGCAGGG GTAATGAAAC AGTATAATAA AGTGACTCCA GAAGATTTAG ACGCGATGCT TGATCTCAAT CTTAAAGGGA GTTTTTATAC CACCCAAGCA GTGGCGAATG TGATGAAAGA ACAGCGTTCG GGTCACATTT GTAATATTAT TGGGATTTTG GGTAAACATT CAATGGCCAT GGCTTCTGCT TATTGTGCCT CAAAATTTGG CGCAGTGGGG TTTAGCAAGT GTATCGCTGA GGAAGTGAAA CGCTATGGTA TTAAAATGAC GCTTTTTTAT TTTGGGGGCA TTGATACTCC TTTTTGGGAT AATGTTGCTT TAAAAGTAGA CCGCAATAAA ATGTTAACTC CCCAAACGGC TGCTGAGGCG ATCGAGTTTG CCTTAAAAGC TGATCCTCAA GCGGTTCCAA TGGAAATTAA TATTCAACCC GAAAGTCATT TATTTTTCTA A
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Protein sequence | MQDKVILIVG ATGGIGSTLG QKLSNAGAKL ILAGRNHQKL TDLSDQLAQK TSVMAVPTDI TNPQQVETLM AKALAQFGRI DVLVNAAGAG VMKQYNKVTP EDLDAMLDLN LKGSFYTTQA VANVMKEQRS GHICNIIGIL GKHSMAMASA YCASKFGAVG FSKCIAEEVK RYGIKMTLFY FGGIDTPFWD NVALKVDRNK MLTPQTAAEA IEFALKADPQ AVPMEINIQP ESHLFF
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