Gene Spea_0532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0532 
Symbol 
ID5660932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp656680 
End bp657342 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content50% 
IMG OID641235077 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001500395 
Protein GI157960361 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00000466004 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTAA TTTCCGGAGC CAGTAGCGGA TTAGGCGCAG CGCTCGCCAA ACGTTATGGC 
GCAGAACAAC CAATTTGTAT CAGTGGTCGC AATAGCGAGC GTTTACAGCT AGTTGCGAAA 
GAGGTAAGCC AGCCTTGTCA GGCCCAGGTT ACCGACCTTT GTGATGCGAG TGCCGTTGAG 
TCCCTATTCG ATAACCTCCC AACGACGCCA TCCTTGATTA TCCATAGCGC AGGCAGTGGT 
TATTTTGGCC CTATCGAGTC TCAGTCTCCA GAGGCCATTA AAGACCTACT CAATAACAAT 
GTGACTTCGG CAATTTTTTT GCTGCGCGAG GCGGTGAAAC GTTATAAAGA GCAAAATGTG 
ACAGTCGTGA TAGTGATGTC GACTGCGGCG CTGGTACCTA AGGCTGAAGA GTCAACCTAC 
TGCGCAGCTA AGTGGGCGGT TAAGGGGTTA ATTGAATCGG TGCGTCTAGA GCTTAAGAAT 
AGCCCGATGA AGCTGATTGC CGTCTATCCA GGTGGCATGG ACACAGACTT TTGGCCGAGC 
AGCGGCAAAA TAGCTAACAC CAGCAGCTTT ATGAGCGCCG ATGAAGCGGC TGGCATGCTA 
AAGCAGGCAC TGCAAAGTAC TGAGCATGGT TATATAGCCG ATCTGACCAT AGCCCGAGGT 
TAG
 
Protein sequence
MILISGASSG LGAALAKRYG AEQPICISGR NSERLQLVAK EVSQPCQAQV TDLCDASAVE 
SLFDNLPTTP SLIIHSAGSG YFGPIESQSP EAIKDLLNNN VTSAIFLLRE AVKRYKEQNV 
TVVIVMSTAA LVPKAEESTY CAAKWAVKGL IESVRLELKN SPMKLIAVYP GGMDTDFWPS 
SGKIANTSSF MSADEAAGML KQALQSTEHG YIADLTIARG