More than 300 homologs were found in PanDaTox collection
for query gene Lreu_0660 on replicon NC_009513
Organism: Lactobacillus reuteri DSM 20016



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009513  Lreu_0660  short-chain dehydrogenase/reductase SDR  100 
 
 
284 aa  585  1e-166  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0875  Short-chain dehydrogenase of various substrate specificities  43.97 
 
 
264 aa  233  2.0000000000000002e-60  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  0.00123287 
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  39.31 
 
 
262 aa  191  1e-47  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  38.96 
 
 
264 aa  186  4e-46  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  39.36 
 
 
264 aa  186  4e-46  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  36.95 
 
 
264 aa  184  1.0000000000000001e-45  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  38.96 
 
 
264 aa  184  1.0000000000000001e-45  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  38.96 
 
 
264 aa  184  2.0000000000000003e-45  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  38.96 
 
 
264 aa  184  2.0000000000000003e-45  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  38.96 
 
 
264 aa  184  2.0000000000000003e-45  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  38.96 
 
 
264 aa  184  2.0000000000000003e-45  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  38.96 
 
 
264 aa  183  2.0000000000000003e-45  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  38.96 
 
 
264 aa  181  1e-44  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  38.15 
 
 
264 aa  180  2.9999999999999997e-44  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2271  short-chain dehydrogenase/reductase SDR  38.34 
 
 
262 aa  178  7e-44  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1192  oxidoreductase, short chain dehydrogenase/reductase family  35.47 
 
 
255 aa  171  2e-41  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1209  short chain dehydrogenase/reductase family oxidoreductase  32.17 
 
 
253 aa  146  4.0000000000000006e-34  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  36.2 
 
 
255 aa  135  5e-31  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  30.89 
 
 
261 aa  130  3e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  31.35 
 
 
258 aa  129  7.000000000000001e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012028  Hlac_3251  short-chain dehydrogenase/reductase SDR  35.93 
 
 
259 aa  127  2.0000000000000002e-28  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_009485  BBta_3170  putative Short-chain dehydrogenase/reductase  37.4 
 
 
544 aa  127  2.0000000000000002e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0745281 
 
 
-
 
NC_009620  Smed_3758  short-chain dehydrogenase/reductase SDR  33.46 
 
 
299 aa  127  3e-28  Sinorhizobium medicae WSM419  Bacteria  normal  0.297651  normal 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  34.12 
 
 
273 aa  126  4.0000000000000003e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1331  short-chain dehydrogenase/reductase SDR  34.75 
 
 
332 aa  126  4.0000000000000003e-28  Methylobacterium populi BJ001  Bacteria  normal  0.261589  normal  0.281891 
 
 
-
 
NC_013172  Bfae_04660  2-hydroxycyclohexane-1-carbonyl-CoA dehydrogenase  33.77 
 
 
261 aa  125  5e-28  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  34.75 
 
 
266 aa  125  6e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp0362  hypothetical protein  34.18 
 
 
257 aa  124  2e-27  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_0761  short-chain dehydrogenase/reductase SDR  30.34 
 
 
277 aa  124  2e-27  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.416641 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  31.32 
 
 
264 aa  124  2e-27  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  30.04 
 
 
267 aa  123  3e-27  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_010511  M446_1704  short-chain dehydrogenase/reductase SDR  33.6 
 
 
327 aa  123  4e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.151565  normal 
 
 
-
 
NC_006369  lpl0338  hypothetical protein  34.18 
 
 
257 aa  122  5e-27  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_2888  Short-chain dehydrogenase/reductase SDR  34.96 
 
 
257 aa  122  5e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0119499 
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  33.47 
 
 
321 aa  122  5e-27  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_009440  Msed_1778  short-chain dehydrogenase/reductase SDR  33.19 
 
 
243 aa  122  6e-27  Metallosphaera sedula DSM 5348  Archaea  normal  0.809428  normal 
 
 
-
 
NC_007413  Ava_2965  Short-chain dehydrogenase/reductase SDR  29.46 
 
 
293 aa  122  9e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0363  sorbitol dehydrogenase  34.76 
 
 
257 aa  120  1.9999999999999998e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3781  sorbitol dehydrogenase  33.33 
 
 
257 aa  120  1.9999999999999998e-26  Chelativorans sp. BNC1  Bacteria  normal  0.360615  n/a   
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  36 
 
 
264 aa  120  3e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011885  Cyan7425_0007  short-chain dehydrogenase/reductase SDR  31.82 
 
 
300 aa  120  3e-26  Cyanothece sp. PCC 7425  Bacteria  n/a    normal  0.67964 
 
 
-
 
NC_013385  Adeg_0287  short-chain dehydrogenase/reductase SDR  34.68 
 
 
253 aa  119  4.9999999999999996e-26  Ammonifex degensii KC4  Bacteria  normal  0.129193  n/a   
 
 
-
 
NC_013757  Gobs_3104  short-chain dehydrogenase/reductase SDR  33.48 
 
 
252 aa  119  6e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP2049  short chain dehydrogenase/reductase family oxidoreductase  33.33 
 
 
230 aa  119  7.999999999999999e-26  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2596  Short-chain dehydrogenase/reductase SDR  33.61 
 
 
287 aa  119  7.999999999999999e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  0.7335  normal 
 
 
-
 
BN001308  ANIA_00618  conserved hypothetical protein  32.5 
 
 
268 aa  118  9e-26  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.767704 
 
 
-
 
NC_013739  Cwoe_5549  short-chain dehydrogenase/reductase SDR  29.57 
 
 
269 aa  118  9.999999999999999e-26  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0767  short-chain dehydrogenase/reductase SDR  34.32 
 
 
330 aa  118  9.999999999999999e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.415615 
 
 
-
 
NC_009668  Oant_3850  sorbitol dehydrogenase  33.33 
 
 
256 aa  118  9.999999999999999e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4381  short-chain dehydrogenase/reductase SDR  31.25 
 
 
248 aa  117  1.9999999999999998e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.297747  hitchhiker  0.00314525 
 
 
-
 
NC_014212  Mesil_1171  short-chain dehydrogenase/reductase SDR  33.33 
 
 
238 aa  117  1.9999999999999998e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.399765 
 
 
-
 
NC_011989  Avi_3571  sorbitol dehydrogenase  34.69 
 
 
258 aa  117  1.9999999999999998e-25  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  29.18 
 
 
265 aa  117  1.9999999999999998e-25  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_009719  Plav_3507  short-chain dehydrogenase/reductase SDR  30.94 
 
 
355 aa  117  1.9999999999999998e-25  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  32.17 
 
 
262 aa  117  3e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_010172  Mext_1019  short-chain dehydrogenase/reductase SDR  33.9 
 
 
330 aa  116  3.9999999999999997e-25  Methylobacterium extorquens PA1  Bacteria  normal  0.0961773  normal 
 
 
-
 
NC_008262  CPR_2585  short chain dehydrogenase/reductase family oxidoreductase  34.87 
 
 
257 aa  116  3.9999999999999997e-25  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1211  short-chain dehydrogenase/reductase SDR  32.58 
 
 
250 aa  116  3.9999999999999997e-25  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.663428  n/a   
 
 
-
 
NC_008261  CPF_2906  short chain dehydrogenase/reductase family oxidoreductase  35.57 
 
 
257 aa  116  5e-25  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2639  short-chain dehydrogenase/reductase SDR  32.74 
 
 
238 aa  116  5e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  0.37123  n/a   
 
 
-
 
NC_010581  Bind_2990  short-chain dehydrogenase/reductase SDR  31.32 
 
 
336 aa  115  6e-25  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.753592 
 
 
-
 
NC_011884  Cyan7425_1650  short-chain dehydrogenase/reductase SDR  32.29 
 
 
254 aa  115  6.9999999999999995e-25  Cyanothece sp. PCC 7425  Bacteria  normal  0.206138  normal 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  31.9 
 
 
266 aa  115  7.999999999999999e-25  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_013743  Htur_2629  short-chain dehydrogenase/reductase SDR  32.54 
 
 
317 aa  115  7.999999999999999e-25  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009921  Franean1_5718  short-chain dehydrogenase/reductase SDR  33.2 
 
 
276 aa  115  8.999999999999998e-25  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  32.03 
 
 
259 aa  114  1.0000000000000001e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1361  short-chain dehydrogenase/reductase SDR  34.4 
 
 
334 aa  114  1.0000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0134131 
 
 
-
 
NC_012034  Athe_0501  short-chain dehydrogenase/reductase SDR  29.34 
 
 
264 aa  114  1.0000000000000001e-24  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.132419  n/a   
 
 
-
 
NC_011894  Mnod_3437  short-chain dehydrogenase/reductase SDR  31.05 
 
 
262 aa  114  1.0000000000000001e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0818  short-chain dehydrogenase/reductase SDR  35.53 
 
 
278 aa  114  1.0000000000000001e-24  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  29.18 
 
 
265 aa  115  1.0000000000000001e-24  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_3438  3-ketoacyl-(acyl-carrier-protein) reductase  30.67 
 
 
252 aa  114  1.0000000000000001e-24  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3307  short-chain dehydrogenase/reductase SDR  31.87 
 
 
275 aa  115  1.0000000000000001e-24  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1607  3-ketoacyl-(acyl-carrier-protein) reductase  34.68 
 
 
248 aa  114  2.0000000000000002e-24  Vibrio cholerae O395  Bacteria  hitchhiker  0.000000000000319104  n/a   
 
 
-
 
NC_013946  Mrub_1117  short-chain dehydrogenase/reductase SDR  31.98 
 
 
233 aa  114  2.0000000000000002e-24  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.000000223483  normal  0.996665 
 
 
-
 
NC_010682  Rpic_1295  short chain dehydrogenase  34.39 
 
 
602 aa  114  2.0000000000000002e-24  Ralstonia pickettii 12J  Bacteria  normal  0.101432  normal  0.699766 
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  33.47 
 
 
263 aa  114  2.0000000000000002e-24  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3398  short chain dehydrogenase  35.03 
 
 
595 aa  114  2.0000000000000002e-24  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_3599  short-chain dehydrogenase/reductase SDR  34.68 
 
 
256 aa  114  2.0000000000000002e-24  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  32.53 
 
 
273 aa  114  2.0000000000000002e-24  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_008543  Bcen2424_4969  short chain dehydrogenase  35.03 
 
 
595 aa  114  2.0000000000000002e-24  Burkholderia cenocepacia HI2424  Bacteria  normal  0.300188  normal  0.358584 
 
 
-
 
NC_008639  Cpha266_2492  3-oxoacyl-[acyl-carrier-protein] reductase  31.51 
 
 
245 aa  114  2.0000000000000002e-24  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  36.51 
 
 
258 aa  113  3e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_011729  PCC7424_3439  short-chain dehydrogenase/reductase SDR  28.46 
 
 
270 aa  113  3e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.349709 
 
 
-
 
NC_011884  Cyan7425_3728  short-chain dehydrogenase/reductase SDR  32.13 
 
 
241 aa  114  3e-24  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_1626  3-hydroxy acid dehydrogenase  33.04 
 
 
248 aa  114  3e-24  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.000000177661  normal 
 
 
-
 
NC_010515  Bcenmc03_5317  short chain dehydrogenase  35.03 
 
 
595 aa  113  3e-24  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.247804  normal  0.120372 
 
 
-
 
NC_013745  Htur_4636  short-chain dehydrogenase/reductase SDR  32.74 
 
 
254 aa  114  3e-24  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_008254  Meso_3522  short-chain dehydrogenase/reductase SDR  34.55 
 
 
289 aa  113  3e-24  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0738  short-chain dehydrogenase/reductase SDR  33.06 
 
 
280 aa  113  3e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010552  BamMC406_4910  short chain dehydrogenase  36.04 
 
 
595 aa  113  3e-24  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_1129  short-chain dehydrogenase/reductase SDR  33.51 
 
 
278 aa  113  3e-24  Methanoculleus marisnigri JR1  Archaea  normal  0.561593  n/a   
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  39.06 
 
 
264 aa  113  4.0000000000000004e-24  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  31.88 
 
 
258 aa  113  4.0000000000000004e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  31.74 
 
 
262 aa  113  4.0000000000000004e-24  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  34.38 
 
 
260 aa  113  4.0000000000000004e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_6830  oxidoreductase  35.57 
 
 
265 aa  112  5e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.356358 
 
 
-
 
NC_010803  Clim_0167  3-oxoacyl-(acyl-carrier-protein) reductase  30.99 
 
 
245 aa  112  5e-24  Chlorobium limicola DSM 245  Bacteria  normal  0.619009  n/a   
 
 
-
 
NC_011369  Rleg2_0269  sorbitol dehydrogenase  34.29 
 
 
263 aa  112  5e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011126  HY04AAS1_0509  3-oxoacyl-(acyl-carrier-protein) reductase  31.56 
 
 
245 aa  112  5e-24  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
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