More than 300 homologs were found in PanDaTox collection
for query gene Caci_5627 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_5627  short-chain dehydrogenase/reductase SDR  100 
 
 
282 aa  557  1e-158  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.193827 
 
 
-
 
NC_009380  Strop_2396  short-chain dehydrogenase/reductase SDR  55.47 
 
 
321 aa  250  2e-65  Salinispora tropica CNB-440  Bacteria  normal  0.13478  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  49.63 
 
 
281 aa  241  1e-62  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  47.41 
 
 
271 aa  225  7e-58  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  46.47 
 
 
286 aa  223  4e-57  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  47.6 
 
 
273 aa  220  1.9999999999999999e-56  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  45.39 
 
 
279 aa  219  3.9999999999999997e-56  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_009953  Sare_2544  short-chain dehydrogenase/reductase SDR  53.36 
 
 
313 aa  217  2e-55  Salinispora arenicola CNS-205  Bacteria  normal  0.638785  decreased coverage  0.00000422955 
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  45.05 
 
 
296 aa  210  2e-53  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  45.05 
 
 
296 aa  209  4e-53  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_009767  Rcas_3066  short-chain dehydrogenase/reductase SDR  45.45 
 
 
273 aa  209  6e-53  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.172953  normal 
 
 
-
 
NC_007973  Rmet_3599  short-chain dehydrogenase/reductase SDR  42.45 
 
 
296 aa  201  9.999999999999999e-51  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  43.91 
 
 
315 aa  199  5e-50  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_010511  M446_3686  short-chain dehydrogenase/reductase SDR  46.49 
 
 
273 aa  198  9e-50  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00031135 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  41.54 
 
 
278 aa  197  2.0000000000000003e-49  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  43.54 
 
 
308 aa  197  2.0000000000000003e-49  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  43.54 
 
 
308 aa  197  2.0000000000000003e-49  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_007952  Bxe_B1790  short chain dehydrogenase  43.1 
 
 
307 aa  197  2.0000000000000003e-49  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.00000125648 
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  43.54 
 
 
308 aa  197  2.0000000000000003e-49  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  43.54 
 
 
308 aa  197  2.0000000000000003e-49  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  44.84 
 
 
281 aa  197  2.0000000000000003e-49  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  43.54 
 
 
308 aa  197  2.0000000000000003e-49  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_010515  Bcenmc03_5625  short-chain dehydrogenase/reductase SDR  42.75 
 
 
309 aa  196  3e-49  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.285502  normal 
 
 
-
 
NC_008543  Bcen2424_4675  short-chain dehydrogenase/reductase SDR  42.75 
 
 
309 aa  196  3e-49  Burkholderia cenocepacia HI2424  Bacteria  normal  0.396312  normal  0.215379 
 
 
-
 
NC_010676  Bphyt_4878  short-chain dehydrogenase/reductase SDR  42.41 
 
 
302 aa  196  4.0000000000000005e-49  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00176242  normal  0.778008 
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  40.75 
 
 
279 aa  194  1e-48  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_008061  Bcen_3693  short-chain dehydrogenase/reductase SDR  42.38 
 
 
309 aa  194  1e-48  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1144  Short-chain dehydrogenase/reductase SDR  41.64 
 
 
307 aa  193  3e-48  Burkholderia sp. 383  Bacteria  normal  0.151567  normal  0.117156 
 
 
-
 
NC_014158  Tpau_2257  short-chain dehydrogenase/reductase SDR  44.36 
 
 
275 aa  192  4e-48  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.116431  n/a   
 
 
-
 
NC_010086  Bmul_4018  short-chain dehydrogenase/reductase SDR  41.64 
 
 
312 aa  192  4e-48  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.169146  normal  0.55969 
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  41.91 
 
 
311 aa  192  7e-48  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_007435  BURPS1710b_A1074  short chain dehydrogenase/reductase family oxidoreductase  44.84 
 
 
302 aa  191  1e-47  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2820  dehydrogenases with different specificities  44.84 
 
 
302 aa  191  1e-47  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4692  short-chain dehydrogenase/reductase SDR  45.39 
 
 
274 aa  191  1e-47  Methylobacterium populi BJ001  Bacteria  normal  0.169711  normal  0.0760952 
 
 
-
 
NC_009078  BURPS1106A_A2673  short chain dehydrogenase/reductase family oxidoreductase  44.84 
 
 
302 aa  191  1e-47  Burkholderia pseudomallei 1106a  Bacteria  normal  0.181377  n/a   
 
 
-
 
NC_009524  PsycPRwf_0304  short-chain dehydrogenase/reductase SDR  41.18 
 
 
309 aa  190  2e-47  Psychrobacter sp. PRwf-1  Bacteria  normal  0.074209  normal  0.817715 
 
 
-
 
NC_006349  BMAA0101  short chain dehydrogenase/reductase family oxidoreductase  45.05 
 
 
302 aa  189  2.9999999999999997e-47  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0120  short chain dehydrogenase/reductase family oxidoreductase  45.42 
 
 
302 aa  190  2.9999999999999997e-47  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1539  short chain dehydrogenase/reductase family oxidoreductase  45.42 
 
 
302 aa  190  2.9999999999999997e-47  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1262  short chain dehydrogenase/reductase family oxidoreductase  45.05 
 
 
302 aa  189  2.9999999999999997e-47  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0404  short chain dehydrogenase/reductase family oxidoreductase  43.77 
 
 
302 aa  189  5e-47  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4069  short-chain dehydrogenase/reductase SDR  41.24 
 
 
312 aa  189  5.999999999999999e-47  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.596903 
 
 
-
 
NC_014158  Tpau_1209  short-chain dehydrogenase/reductase SDR  44.66 
 
 
275 aa  186  5e-46  Tsukamurella paurometabola DSM 20162  Bacteria  hitchhiker  0.00962961  n/a   
 
 
-
 
NC_008740  Maqu_0158  short-chain dehydrogenase/reductase SDR  43.07 
 
 
271 aa  185  9e-46  Marinobacter aquaeolei VT8  Bacteria  normal  0.722445  n/a   
 
 
-
 
NC_008699  Noca_3699  short-chain dehydrogenase/reductase SDR  42.12 
 
 
280 aa  181  8.000000000000001e-45  Nocardioides sp. JS614  Bacteria  normal  0.0817481  n/a   
 
 
-
 
NC_011757  Mchl_4548  short-chain dehydrogenase/reductase SDR  45.39 
 
 
274 aa  181  1e-44  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.239905  normal  0.858139 
 
 
-
 
NC_010172  Mext_4179  short-chain dehydrogenase/reductase SDR  45.02 
 
 
274 aa  181  1e-44  Methylobacterium extorquens PA1  Bacteria  normal  0.719073  normal 
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  41.89 
 
 
295 aa  180  2e-44  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_013441  Gbro_1880  short-chain dehydrogenase/reductase SDR  41.38 
 
 
276 aa  179  4e-44  Gordonia bronchialis DSM 43247  Bacteria  normal  0.138576  n/a   
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  42.44 
 
 
300 aa  177  2e-43  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  40.38 
 
 
295 aa  176  3e-43  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  41.7 
 
 
308 aa  176  3e-43  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  41.7 
 
 
300 aa  176  5e-43  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  41.7 
 
 
300 aa  175  8e-43  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_010552  BamMC406_3569  short-chain dehydrogenase/reductase SDR  41.7 
 
 
308 aa  175  8e-43  Burkholderia ambifaria MC40-6  Bacteria  normal  0.683076  hitchhiker  0.00146118 
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  41.7 
 
 
300 aa  175  8e-43  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  41.7 
 
 
300 aa  174  9.999999999999999e-43  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4479  short-chain dehydrogenase/reductase SDR  41.42 
 
 
276 aa  174  9.999999999999999e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0643496  normal  0.318534 
 
 
-
 
NC_009656  PSPA7_3796  putative short-chain dehydrogenase  40.75 
 
 
295 aa  174  1.9999999999999998e-42  Pseudomonas aeruginosa PA7  Bacteria  normal  0.205058  n/a   
 
 
-
 
NC_008347  Mmar10_1139  short-chain dehydrogenase/reductase SDR  42.54 
 
 
277 aa  174  1.9999999999999998e-42  Maricaulis maris MCS10  Bacteria  normal  0.248176  normal  0.05597 
 
 
-
 
NC_009338  Mflv_2216  short-chain dehydrogenase/reductase SDR  39.42 
 
 
276 aa  165  8e-40  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.742045 
 
 
-
 
NC_008146  Mmcs_3975  short-chain dehydrogenase/reductase SDR  40.51 
 
 
276 aa  164  1.0000000000000001e-39  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3989  short-chain dehydrogenase/reductase SDR  40.51 
 
 
276 aa  164  1.0000000000000001e-39  Mycobacterium sp. JLS  Bacteria  normal  0.171067  normal  0.181158 
 
 
-
 
NC_008705  Mkms_4049  short-chain dehydrogenase/reductase SDR  40.51 
 
 
276 aa  164  1.0000000000000001e-39  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2412  short-chain dehydrogenase/reductase SDR  43.02 
 
 
269 aa  164  2.0000000000000002e-39  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00185291  normal 
 
 
-
 
NC_009565  TBFG_13102  short-chain type dehydrogenase/reductase  39.25 
 
 
276 aa  160  2e-38  Mycobacterium tuberculosis F11  Bacteria  normal  0.432292  normal 
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  40.23 
 
 
276 aa  159  4e-38  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_013739  Cwoe_5665  short-chain dehydrogenase/reductase SDR  40.98 
 
 
275 aa  158  1e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2356  short-chain dehydrogenase/reductase SDR  39.05 
 
 
282 aa  142  6e-33  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0998128  n/a   
 
 
-
 
NC_009077  Mjls_1791  short chain dehydrogenase  35.74 
 
 
285 aa  131  1.0000000000000001e-29  Mycobacterium sp. JLS  Bacteria  normal  0.0146977  normal 
 
 
-
 
NC_008146  Mmcs_1810  short chain dehydrogenase  35.36 
 
 
285 aa  130  3e-29  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  34.2 
 
 
275 aa  130  3e-29  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_008705  Mkms_1857  short chain dehydrogenase  35.36 
 
 
285 aa  130  3e-29  Mycobacterium sp. KMS  Bacteria  normal  normal  0.160159 
 
 
-
 
NC_009338  Mflv_4313  short chain dehydrogenase  33.46 
 
 
290 aa  127  3e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  32.61 
 
 
264 aa  125  8.000000000000001e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  32.25 
 
 
264 aa  123  3e-27  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  32.25 
 
 
264 aa  123  3e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  32.25 
 
 
264 aa  123  3e-27  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  32.25 
 
 
264 aa  123  3e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  32.25 
 
 
264 aa  123  3e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  31.52 
 
 
264 aa  121  9.999999999999999e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  31.88 
 
 
264 aa  121  9.999999999999999e-27  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3401  short-chain dehydrogenase/reductase SDR  35.63 
 
 
318 aa  120  3.9999999999999996e-26  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  31.52 
 
 
264 aa  119  3.9999999999999996e-26  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  33.51 
 
 
264 aa  119  6e-26  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_007347  Reut_A1414  short chain dehydrogenase  42.05 
 
 
270 aa  119  6e-26  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  36.65 
 
 
264 aa  118  9e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13074  short chain dehydrogenase  35.55 
 
 
287 aa  118  9.999999999999999e-26  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.486367 
 
 
-
 
NC_011729  PCC7424_4855  short-chain dehydrogenase/reductase SDR  29.41 
 
 
274 aa  117  1.9999999999999998e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008726  Mvan_2034  short chain dehydrogenase  33.71 
 
 
290 aa  117  1.9999999999999998e-25  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.959562 
 
 
-
 
NC_009943  Dole_2823  short chain dehydrogenase  32.06 
 
 
292 aa  117  3e-25  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00207351  n/a   
 
 
-
 
NC_009664  Krad_2525  short-chain dehydrogenase/reductase SDR  33.68 
 
 
276 aa  116  5e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  31.52 
 
 
264 aa  116  5e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_013132  Cpin_6402  short-chain dehydrogenase/reductase SDR  30.42 
 
 
277 aa  115  6e-25  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000182624  normal 
 
 
-
 
NC_010718  Nther_2430  short-chain dehydrogenase/reductase SDR  35.38 
 
 
285 aa  115  1.0000000000000001e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3908  short-chain dehydrogenase/reductase SDR  38.66 
 
 
272 aa  113  3e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.106718  normal  0.186536 
 
 
-
 
NC_011661  Dtur_0425  short-chain dehydrogenase/reductase SDR  34.52 
 
 
241 aa  113  3e-24  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.116852  n/a   
 
 
-
 
NC_008699  Noca_2840  short chain dehydrogenase  33.08 
 
 
302 aa  112  7.000000000000001e-24  Nocardioides sp. JS614  Bacteria  normal  0.28747  n/a   
 
 
-
 
NC_013510  Tcur_0228  short-chain dehydrogenase/reductase SDR  35.95 
 
 
306 aa  112  8.000000000000001e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1038  hypothetical protein  39.41 
 
 
289 aa  112  9e-24  Burkholderia phymatum STM815  Bacteria  normal  0.357237  normal 
 
 
-
 
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