More than 300 homologs were found in PanDaTox collection
for query gene Bcenmc03_3856 on replicon NC_010515
Organism: Burkholderia cenocepacia MC0-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  99.67 
 
 
300 aa  597  1e-170  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  100 
 
 
300 aa  598  1e-170  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  99.67 
 
 
300 aa  597  1e-170  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  95.33 
 
 
300 aa  576  1.0000000000000001e-163  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  91.56 
 
 
308 aa  559  1e-158  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_3569  short-chain dehydrogenase/reductase SDR  91.21 
 
 
308 aa  555  1e-157  Burkholderia ambifaria MC40-6  Bacteria  normal  0.683076  hitchhiker  0.00146118 
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  94.16 
 
 
300 aa  516  1.0000000000000001e-145  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_008835  BMA10229_1539  short chain dehydrogenase/reductase family oxidoreductase  76.69 
 
 
302 aa  459  9.999999999999999e-129  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2673  short chain dehydrogenase/reductase family oxidoreductase  76.33 
 
 
302 aa  459  9.999999999999999e-129  Burkholderia pseudomallei 1106a  Bacteria  normal  0.181377  n/a   
 
 
-
 
NC_006349  BMAA0101  short chain dehydrogenase/reductase family oxidoreductase  77.03 
 
 
302 aa  460  9.999999999999999e-129  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0120  short chain dehydrogenase/reductase family oxidoreductase  76.69 
 
 
302 aa  459  9.999999999999999e-129  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1074  short chain dehydrogenase/reductase family oxidoreductase  76.33 
 
 
302 aa  459  9.999999999999999e-129  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2820  dehydrogenases with different specificities  76.33 
 
 
302 aa  459  9.999999999999999e-129  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1262  short chain dehydrogenase/reductase family oxidoreductase  77.03 
 
 
302 aa  460  9.999999999999999e-129  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0404  short chain dehydrogenase/reductase family oxidoreductase  74.5 
 
 
302 aa  447  1e-125  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1144  Short-chain dehydrogenase/reductase SDR  58.56 
 
 
307 aa  325  7e-88  Burkholderia sp. 383  Bacteria  normal  0.151567  normal  0.117156 
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  62.04 
 
 
311 aa  322  6e-87  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_010515  Bcenmc03_5625  short-chain dehydrogenase/reductase SDR  60.22 
 
 
309 aa  318  6e-86  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.285502  normal 
 
 
-
 
NC_008543  Bcen2424_4675  short-chain dehydrogenase/reductase SDR  60.22 
 
 
309 aa  318  6e-86  Burkholderia cenocepacia HI2424  Bacteria  normal  0.396312  normal  0.215379 
 
 
-
 
NC_010086  Bmul_4018  short-chain dehydrogenase/reductase SDR  60.22 
 
 
312 aa  318  7.999999999999999e-86  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.169146  normal  0.55969 
 
 
-
 
NC_008391  Bamb_4069  short-chain dehydrogenase/reductase SDR  60.22 
 
 
312 aa  317  2e-85  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.596903 
 
 
-
 
NC_008061  Bcen_3693  short-chain dehydrogenase/reductase SDR  59.85 
 
 
309 aa  315  5e-85  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_3599  short-chain dehydrogenase/reductase SDR  57.88 
 
 
296 aa  314  9.999999999999999e-85  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  55.9 
 
 
295 aa  312  3.9999999999999997e-84  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_009656  PSPA7_3796  putative short-chain dehydrogenase  56.68 
 
 
295 aa  309  2.9999999999999997e-83  Pseudomonas aeruginosa PA7  Bacteria  normal  0.205058  n/a   
 
 
-
 
NC_010676  Bphyt_4878  short-chain dehydrogenase/reductase SDR  57.54 
 
 
302 aa  306  2.0000000000000002e-82  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00176242  normal  0.778008 
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  54.27 
 
 
296 aa  306  2.0000000000000002e-82  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  54.27 
 
 
296 aa  305  9.000000000000001e-82  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  57.88 
 
 
308 aa  302  4.0000000000000003e-81  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  57.88 
 
 
308 aa  302  4.0000000000000003e-81  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  57.88 
 
 
308 aa  302  4.0000000000000003e-81  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  57.88 
 
 
308 aa  302  4.0000000000000003e-81  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  57.88 
 
 
308 aa  302  4.0000000000000003e-81  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1790  short chain dehydrogenase  56.84 
 
 
307 aa  302  5.000000000000001e-81  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.00000125648 
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  57.88 
 
 
315 aa  301  1e-80  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  54.15 
 
 
295 aa  292  4e-78  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_008740  Maqu_0158  short-chain dehydrogenase/reductase SDR  54.35 
 
 
271 aa  291  1e-77  Marinobacter aquaeolei VT8  Bacteria  normal  0.722445  n/a   
 
 
-
 
NC_008726  Mvan_4479  short-chain dehydrogenase/reductase SDR  48.55 
 
 
276 aa  267  2e-70  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0643496  normal  0.318534 
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  50 
 
 
276 aa  263  3e-69  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_009077  Mjls_3989  short-chain dehydrogenase/reductase SDR  50 
 
 
276 aa  261  1e-68  Mycobacterium sp. JLS  Bacteria  normal  0.171067  normal  0.181158 
 
 
-
 
NC_008705  Mkms_4049  short-chain dehydrogenase/reductase SDR  50 
 
 
276 aa  261  1e-68  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3975  short-chain dehydrogenase/reductase SDR  50 
 
 
276 aa  261  1e-68  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2216  short-chain dehydrogenase/reductase SDR  48.38 
 
 
276 aa  259  3e-68  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.742045 
 
 
-
 
NC_009524  PsycPRwf_0304  short-chain dehydrogenase/reductase SDR  45.99 
 
 
309 aa  259  5.0000000000000005e-68  Psychrobacter sp. PRwf-1  Bacteria  normal  0.074209  normal  0.817715 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  49.64 
 
 
278 aa  254  1.0000000000000001e-66  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_013441  Gbro_1880  short-chain dehydrogenase/reductase SDR  47.96 
 
 
276 aa  251  8.000000000000001e-66  Gordonia bronchialis DSM 43247  Bacteria  normal  0.138576  n/a   
 
 
-
 
NC_009565  TBFG_13102  short-chain type dehydrogenase/reductase  47.78 
 
 
276 aa  251  1e-65  Mycobacterium tuberculosis F11  Bacteria  normal  0.432292  normal 
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  45.22 
 
 
279 aa  244  9.999999999999999e-64  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_008699  Noca_3699  short-chain dehydrogenase/reductase SDR  47.99 
 
 
280 aa  244  1.9999999999999999e-63  Nocardioides sp. JS614  Bacteria  normal  0.0817481  n/a   
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  46.29 
 
 
279 aa  239  2.9999999999999997e-62  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_014158  Tpau_2257  short-chain dehydrogenase/reductase SDR  49.06 
 
 
275 aa  240  2.9999999999999997e-62  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.116431  n/a   
 
 
-
 
NC_014158  Tpau_1209  short-chain dehydrogenase/reductase SDR  47.94 
 
 
275 aa  238  8e-62  Tsukamurella paurometabola DSM 20162  Bacteria  hitchhiker  0.00962961  n/a   
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  48.36 
 
 
281 aa  227  2e-58  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2356  short-chain dehydrogenase/reductase SDR  46.76 
 
 
282 aa  216  2.9999999999999998e-55  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0998128  n/a   
 
 
-
 
NC_009767  Rcas_3066  short-chain dehydrogenase/reductase SDR  46.49 
 
 
273 aa  214  1.9999999999999998e-54  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.172953  normal 
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  44.98 
 
 
271 aa  201  9.999999999999999e-51  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5665  short-chain dehydrogenase/reductase SDR  45.76 
 
 
275 aa  200  1.9999999999999998e-50  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  44.65 
 
 
286 aa  194  2e-48  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_010172  Mext_4179  short-chain dehydrogenase/reductase SDR  45.96 
 
 
274 aa  187  2e-46  Methylobacterium extorquens PA1  Bacteria  normal  0.719073  normal 
 
 
-
 
NC_011757  Mchl_4548  short-chain dehydrogenase/reductase SDR  44.85 
 
 
274 aa  186  5e-46  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.239905  normal  0.858139 
 
 
-
 
NC_010725  Mpop_4692  short-chain dehydrogenase/reductase SDR  45.22 
 
 
274 aa  179  7e-44  Methylobacterium populi BJ001  Bacteria  normal  0.169711  normal  0.0760952 
 
 
-
 
NC_013131  Caci_5627  short-chain dehydrogenase/reductase SDR  41.7 
 
 
282 aa  176  5e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.193827 
 
 
-
 
NC_009380  Strop_2396  short-chain dehydrogenase/reductase SDR  44.24 
 
 
321 aa  175  9e-43  Salinispora tropica CNB-440  Bacteria  normal  0.13478  normal 
 
 
-
 
NC_009523  RoseRS_2412  short-chain dehydrogenase/reductase SDR  46.15 
 
 
269 aa  174  9.999999999999999e-43  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00185291  normal 
 
 
-
 
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  41.05 
 
 
281 aa  172  5.999999999999999e-42  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  42.86 
 
 
273 aa  170  3e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4287  short-chain dehydrogenase/reductase SDR  39.22 
 
 
276 aa  157  2e-37  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0836216  n/a   
 
 
-
 
NC_008347  Mmar10_1139  short-chain dehydrogenase/reductase SDR  41.67 
 
 
277 aa  157  2e-37  Maricaulis maris MCS10  Bacteria  normal  0.248176  normal  0.05597 
 
 
-
 
NC_010511  M446_3686  short-chain dehydrogenase/reductase SDR  42.44 
 
 
273 aa  156  5.0000000000000005e-37  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00031135 
 
 
-
 
NC_013440  Hoch_5364  short-chain dehydrogenase/reductase SDR  37.36 
 
 
267 aa  153  2.9999999999999998e-36  Haliangium ochraceum DSM 14365  Bacteria  normal  0.676071  normal 
 
 
-
 
NC_009953  Sare_2544  short-chain dehydrogenase/reductase SDR  46.35 
 
 
313 aa  150  2e-35  Salinispora arenicola CNS-205  Bacteria  normal  0.638785  decreased coverage  0.00000422955 
 
 
-
 
NC_009484  Acry_2115  hypothetical protein  41.5 
 
 
292 aa  150  2e-35  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4313  short chain dehydrogenase  36.67 
 
 
290 aa  147  3e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3087  short-chain dehydrogenase/reductase SDR  37.37 
 
 
322 aa  145  6e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0303  short-chain dehydrogenase/reductase SDR  37.05 
 
 
262 aa  142  9e-33  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0313  short-chain dehydrogenase/reductase SDR  37.05 
 
 
262 aa  142  9e-33  Mycobacterium sp. KMS  Bacteria  normal  normal  0.19239 
 
 
-
 
NC_010002  Daci_3363  hypothetical protein  40 
 
 
301 aa  141  9.999999999999999e-33  Delftia acidovorans SPH-1  Bacteria  normal  0.276324  normal 
 
 
-
 
NC_009077  Mjls_0294  short-chain dehydrogenase/reductase SDR  36.69 
 
 
262 aa  141  9.999999999999999e-33  Mycobacterium sp. JLS  Bacteria  normal  0.948025  normal 
 
 
-
 
NC_013174  Jden_0145  short-chain dehydrogenase/reductase SDR  35.74 
 
 
267 aa  142  9.999999999999999e-33  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_03130  short-chain dehydrogenase of unknown substrate specificity  36.49 
 
 
275 aa  140  3e-32  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0852  short-chain dehydrogenase/reductase SDR  38.14 
 
 
286 aa  140  3e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.068211 
 
 
-
 
NC_013510  Tcur_1562  short-chain dehydrogenase/reductase SDR  38.22 
 
 
275 aa  139  3.9999999999999997e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0498761  n/a   
 
 
-
 
NC_009719  Plav_2714  short-chain dehydrogenase/reductase SDR  36.29 
 
 
294 aa  140  3.9999999999999997e-32  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.199953  normal 
 
 
-
 
NC_013946  Mrub_0175  short-chain dehydrogenase/reductase SDR  38.71 
 
 
267 aa  139  3.9999999999999997e-32  Meiothermus ruber DSM 1279  Bacteria  normal  0.319176  normal 
 
 
-
 
NC_008554  Sfum_0522  short-chain dehydrogenase/reductase SDR  39.42 
 
 
278 aa  139  3.9999999999999997e-32  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13074  short chain dehydrogenase  36.76 
 
 
287 aa  138  8.999999999999999e-32  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.486367 
 
 
-
 
NC_011831  Cagg_3168  short-chain dehydrogenase/reductase SDR  39.59 
 
 
269 aa  137  1e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.685444  normal 
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  34.7 
 
 
275 aa  137  2e-31  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_013757  Gobs_0783  short-chain dehydrogenase/reductase SDR  36.24 
 
 
298 aa  137  3.0000000000000003e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_2691  short-chain dehydrogenase/reductase SDR  37.92 
 
 
322 aa  137  3.0000000000000003e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.16655  normal 
 
 
-
 
NC_007794  Saro_0794  short-chain dehydrogenase/reductase SDR  35.83 
 
 
310 aa  134  9.999999999999999e-31  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.113929  n/a   
 
 
-
 
NC_014165  Tbis_2317  short-chain dehydrogenase/reductase SDR  36.08 
 
 
263 aa  133  3e-30  Thermobispora bispora DSM 43833  Bacteria  normal  0.49068  normal  0.325129 
 
 
-
 
NC_007796  Mhun_2367  short-chain dehydrogenase/reductase SDR  36.96 
 
 
272 aa  134  3e-30  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.264463 
 
 
-
 
NC_008639  Cpha266_0762  short-chain dehydrogenase/reductase SDR  36.29 
 
 
280 aa  133  3e-30  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2525  short-chain dehydrogenase/reductase SDR  36.86 
 
 
276 aa  133  3e-30  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1038  hypothetical protein  41.29 
 
 
289 aa  131  1.0000000000000001e-29  Burkholderia phymatum STM815  Bacteria  normal  0.357237  normal 
 
 
-
 
NC_008726  Mvan_2034  short chain dehydrogenase  36.03 
 
 
290 aa  130  2.0000000000000002e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.959562 
 
 
-
 
NC_009077  Mjls_1791  short chain dehydrogenase  34.03 
 
 
285 aa  130  3e-29  Mycobacterium sp. JLS  Bacteria  normal  0.0146977  normal 
 
 
-
 
NC_007796  Mhun_2368  short-chain dehydrogenase/reductase SDR  33.45 
 
 
274 aa  129  5.0000000000000004e-29  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.448097 
 
 
-
 
NC_008705  Mkms_1857  short chain dehydrogenase  33.68 
 
 
285 aa  129  6e-29  Mycobacterium sp. KMS  Bacteria  normal  normal  0.160159 
 
 
-
 
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