| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2621 |
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| Symbol | |
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| ID | 5107931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2883443 |
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| End bp | 2884330 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503865 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001188109 |
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| Protein GI | 146307644 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.786359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCT TCGAGAACAA GGTTGCCGCC ATCACCGGCG CCGGCTCCGG TATCGGCCGC
GCCCTCGCCT ATCACCTGGC GCGCCAGGGC TGCCACCTGG CGCTGTCCGA CGTCAATGTC
GAGGGCCTCC AGGAAACCGT CGAGCAGGCC CGCAAGCTCG GCGTCACCGT CAGTGGACAA
CGCGTCGACG TCGCCGACCG CGCTGCCGTC GAGGCCTGGG CGGAGCAGGT CGTCAGCGAG
TTCGGCCGGG TCAACGCCAT CTTCAACAAT GCCGGCGTGG CTCAGGGCGG CACCGTGGAG
GGCAACGACC ATACCGACTA CGAATGGATC ATGAACATCA ACTTCTGGGG TGTGGTCAAC
GGCACCAAGG CATTCCTGCC CTACCTCAAG GCGGCCGGCC AGGGTCACGT GATCAACGTC
TCCAGCGTGT TCGGCCTGTT CTCTCAGCCG GGCATGAGCG CCTACAACGC CAGCAAGTTC
GCCGTGCGCG GCTTTACCGA ATCGCTGCGC CAGGAACTGG ACATGGCCGA TTGCGGGGTT
TCCGCCAGCT GCGTGCATCC GGGCGGAATC AAGACCAACA TCGCCAAGAC GGCGCGGATG
AACGACAGCC TGGCCAAGGT CACCGGCCAG GAAGCCGAGC AGGCGCGCCA GCAGTTCAAC
GACCAGTTGC TGCGCACCAC GCCGGAACAG GCGGCCAAGG TCATCGTAAA CGGAGTGCTG
GCCAACAAAC GGCGCATTCT GATCGGTGCC GATGCCCATG CCCTGGACTG GATGCAGCGC
AGCATGCCGG CGCTGTATCA GCGCCTGGTG ACCGTCTCGA TGCGCCTGGC GGCGCGCTTT
GCACCGAAAC CGAGGAGCGT GAACAAGGTG AGTGAGGCGA CCGAGTAG
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| Protein sequence | MKSFENKVAA ITGAGSGIGR ALAYHLARQG CHLALSDVNV EGLQETVEQA RKLGVTVSGQ
RVDVADRAAV EAWAEQVVSE FGRVNAIFNN AGVAQGGTVE GNDHTDYEWI MNINFWGVVN
GTKAFLPYLK AAGQGHVINV SSVFGLFSQP GMSAYNASKF AVRGFTESLR QELDMADCGV
SASCVHPGGI KTNIAKTARM NDSLAKVTGQ EAEQARQQFN DQLLRTTPEQ AAKVIVNGVL
ANKRRILIGA DAHALDWMQR SMPALYQRLV TVSMRLAARF APKPRSVNKV SEATE
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