More than 300 homologs were found in PanDaTox collection
for query gene Mvan_2034 on replicon NC_008726
Organism: Mycobacterium vanbaalenii PYR-1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008726  Mvan_2034  short chain dehydrogenase  100 
 
 
290 aa  578  1e-164  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.959562 
 
 
-
 
NC_009338  Mflv_4313  short chain dehydrogenase  84.83 
 
 
290 aa  501  1e-141  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1810  short chain dehydrogenase  84.06 
 
 
285 aa  471  1e-132  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1857  short chain dehydrogenase  84.06 
 
 
285 aa  471  1e-132  Mycobacterium sp. KMS  Bacteria  normal  normal  0.160159 
 
 
-
 
NC_009077  Mjls_1791  short chain dehydrogenase  83.7 
 
 
285 aa  469  1.0000000000000001e-131  Mycobacterium sp. JLS  Bacteria  normal  0.0146977  normal 
 
 
-
 
NC_009565  TBFG_13074  short chain dehydrogenase  76.66 
 
 
287 aa  448  1e-125  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.486367 
 
 
-
 
NC_009943  Dole_2823  short chain dehydrogenase  57.97 
 
 
292 aa  318  7.999999999999999e-86  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00207351  n/a   
 
 
-
 
NC_014158  Tpau_2974  short-chain dehydrogenase/reductase SDR  60.52 
 
 
309 aa  317  2e-85  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3401  short-chain dehydrogenase/reductase SDR  61.19 
 
 
318 aa  300  2e-80  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2840  short chain dehydrogenase  51.85 
 
 
302 aa  257  2e-67  Nocardioides sp. JS614  Bacteria  normal  0.28747  n/a   
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  37.74 
 
 
279 aa  166  5.9999999999999996e-40  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_008699  Noca_3699  short-chain dehydrogenase/reductase SDR  36.2 
 
 
280 aa  160  3e-38  Nocardioides sp. JS614  Bacteria  normal  0.0817481  n/a   
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  37.11 
 
 
279 aa  153  2.9999999999999998e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_009565  TBFG_13102  short-chain type dehydrogenase/reductase  37.02 
 
 
276 aa  148  9e-35  Mycobacterium tuberculosis F11  Bacteria  normal  0.432292  normal 
 
 
-
 
NC_009767  Rcas_3066  short-chain dehydrogenase/reductase SDR  36.63 
 
 
273 aa  145  7.0000000000000006e-34  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.172953  normal 
 
 
-
 
NC_013510  Tcur_1562  short-chain dehydrogenase/reductase SDR  36.51 
 
 
275 aa  142  6e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0498761  n/a   
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  34.85 
 
 
278 aa  141  9.999999999999999e-33  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  34.44 
 
 
281 aa  140  3e-32  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0158  short-chain dehydrogenase/reductase SDR  34.85 
 
 
271 aa  138  1e-31  Marinobacter aquaeolei VT8  Bacteria  normal  0.722445  n/a   
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  33.45 
 
 
295 aa  137  3.0000000000000003e-31  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_013159  Svir_33830  short chain dehydrogenase  37.69 
 
 
568 aa  136  5e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1880  short-chain dehydrogenase/reductase SDR  33.33 
 
 
276 aa  133  3e-30  Gordonia bronchialis DSM 43247  Bacteria  normal  0.138576  n/a   
 
 
-
 
NC_008726  Mvan_4479  short-chain dehydrogenase/reductase SDR  31.95 
 
 
276 aa  132  7.999999999999999e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0643496  normal  0.318534 
 
 
-
 
NC_014158  Tpau_1209  short-chain dehydrogenase/reductase SDR  30.94 
 
 
275 aa  131  1.0000000000000001e-29  Tsukamurella paurometabola DSM 20162  Bacteria  hitchhiker  0.00962961  n/a   
 
 
-
 
NC_009338  Mflv_3370  short-chain dehydrogenase/reductase SDR  35.98 
 
 
285 aa  131  1.0000000000000001e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.976299 
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  35.9 
 
 
300 aa  130  2.0000000000000002e-29  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2317  short-chain dehydrogenase/reductase SDR  34.52 
 
 
263 aa  130  2.0000000000000002e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.49068  normal  0.325129 
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  36.03 
 
 
300 aa  130  2.0000000000000002e-29  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_007650  BTH_II0404  short chain dehydrogenase/reductase family oxidoreductase  33.83 
 
 
302 aa  130  3e-29  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  31.34 
 
 
276 aa  129  4.0000000000000003e-29  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  36.03 
 
 
300 aa  130  4.0000000000000003e-29  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  36.03 
 
 
300 aa  130  4.0000000000000003e-29  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  35.09 
 
 
308 aa  129  6e-29  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008835  BMA10229_1539  short chain dehydrogenase/reductase family oxidoreductase  34.81 
 
 
302 aa  129  7.000000000000001e-29  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1074  short chain dehydrogenase/reductase family oxidoreductase  34.2 
 
 
302 aa  129  7.000000000000001e-29  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6830  oxidoreductase  36.82 
 
 
265 aa  129  7.000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.356358 
 
 
-
 
NC_009078  BURPS1106A_A2673  short chain dehydrogenase/reductase family oxidoreductase  34.2 
 
 
302 aa  129  7.000000000000001e-29  Burkholderia pseudomallei 1106a  Bacteria  normal  0.181377  n/a   
 
 
-
 
NC_009079  BMA10247_A0120  short chain dehydrogenase/reductase family oxidoreductase  34.81 
 
 
302 aa  129  7.000000000000001e-29  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2820  dehydrogenases with different specificities  34.2 
 
 
302 aa  129  7.000000000000001e-29  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0101  short chain dehydrogenase/reductase family oxidoreductase  34.81 
 
 
302 aa  129  8.000000000000001e-29  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  33.82 
 
 
308 aa  129  8.000000000000001e-29  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1262  short chain dehydrogenase/reductase family oxidoreductase  34.81 
 
 
302 aa  129  8.000000000000001e-29  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  33.82 
 
 
308 aa  129  8.000000000000001e-29  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  33.82 
 
 
308 aa  129  8.000000000000001e-29  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4018  short-chain dehydrogenase/reductase SDR  35.43 
 
 
312 aa  129  8.000000000000001e-29  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.169146  normal  0.55969 
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  33.82 
 
 
308 aa  129  8.000000000000001e-29  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  33.82 
 
 
308 aa  129  8.000000000000001e-29  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_010552  BamMC406_3569  short-chain dehydrogenase/reductase SDR  35.09 
 
 
308 aa  129  8.000000000000001e-29  Burkholderia ambifaria MC40-6  Bacteria  normal  0.683076  hitchhiker  0.00146118 
 
 
-
 
NC_009380  Strop_2396  short-chain dehydrogenase/reductase SDR  39.76 
 
 
321 aa  127  2.0000000000000002e-28  Salinispora tropica CNB-440  Bacteria  normal  0.13478  normal 
 
 
-
 
NC_013757  Gobs_2356  short-chain dehydrogenase/reductase SDR  36.69 
 
 
282 aa  127  2.0000000000000002e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0998128  n/a   
 
 
-
 
NC_010515  Bcenmc03_5625  short-chain dehydrogenase/reductase SDR  34.39 
 
 
309 aa  127  2.0000000000000002e-28  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.285502  normal 
 
 
-
 
NC_008061  Bcen_3693  short-chain dehydrogenase/reductase SDR  34.39 
 
 
309 aa  127  2.0000000000000002e-28  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4069  short-chain dehydrogenase/reductase SDR  34.78 
 
 
312 aa  127  2.0000000000000002e-28  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.596903 
 
 
-
 
NC_008543  Bcen2424_4675  short-chain dehydrogenase/reductase SDR  34.39 
 
 
309 aa  127  2.0000000000000002e-28  Burkholderia cenocepacia HI2424  Bacteria  normal  0.396312  normal  0.215379 
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  35.21 
 
 
300 aa  127  3e-28  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_007511  Bcep18194_B1144  Short-chain dehydrogenase/reductase SDR  33.6 
 
 
307 aa  126  5e-28  Burkholderia sp. 383  Bacteria  normal  0.151567  normal  0.117156 
 
 
-
 
NC_008146  Mmcs_3975  short-chain dehydrogenase/reductase SDR  32.03 
 
 
276 aa  125  6e-28  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3989  short-chain dehydrogenase/reductase SDR  32.03 
 
 
276 aa  125  6e-28  Mycobacterium sp. JLS  Bacteria  normal  0.171067  normal  0.181158 
 
 
-
 
NC_008705  Mkms_4049  short-chain dehydrogenase/reductase SDR  32.03 
 
 
276 aa  125  6e-28  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4348  short-chain dehydrogenase/reductase SDR  35.88 
 
 
274 aa  125  7e-28  Mycobacterium sp. JLS  Bacteria  normal  normal  0.201544 
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  33.46 
 
 
315 aa  125  8.000000000000001e-28  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_008146  Mmcs_4117  short-chain dehydrogenase/reductase SDR  35.88 
 
 
274 aa  125  9e-28  Mycobacterium sp. MCS  Bacteria  normal  0.0106138  n/a   
 
 
-
 
NC_008705  Mkms_4192  short-chain dehydrogenase/reductase SDR  35.88 
 
 
274 aa  125  9e-28  Mycobacterium sp. KMS  Bacteria  normal  0.879856  normal 
 
 
-
 
NC_009338  Mflv_2216  short-chain dehydrogenase/reductase SDR  30.86 
 
 
276 aa  124  1e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.742045 
 
 
-
 
NC_011060  Ppha_1918  short-chain dehydrogenase/reductase SDR  35 
 
 
280 aa  125  1e-27  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.000963224  n/a   
 
 
-
 
NC_009656  PSPA7_3796  putative short-chain dehydrogenase  33.11 
 
 
295 aa  124  2e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  0.205058  n/a   
 
 
-
 
NC_014158  Tpau_2257  short-chain dehydrogenase/reductase SDR  33.07 
 
 
275 aa  124  2e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.116431  n/a   
 
 
-
 
NC_009943  Dole_2194  short-chain dehydrogenase/reductase SDR  33.2 
 
 
280 aa  123  3e-27  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0155651  n/a   
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  33.85 
 
 
311 aa  123  3e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_009075  BURPS668_A0913  short chain dehydrogenase  32.95 
 
 
596 aa  123  4e-27  Burkholderia pseudomallei 668  Bacteria  normal  0.427766  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2174  short chain dehydrogenase  32.95 
 
 
596 aa  123  4e-27  Burkholderia pseudomallei 1710b  Bacteria  normal  0.828892  n/a   
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  32.28 
 
 
296 aa  123  4e-27  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_009078  BURPS1106A_A0820  short chain dehydrogenase  32.95 
 
 
596 aa  123  4e-27  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  31.94 
 
 
296 aa  122  5e-27  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_2306  short-chain dehydrogenase/reductase SDR  37.19 
 
 
286 aa  122  6e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.930868  n/a   
 
 
-
 
NC_008554  Sfum_0522  short-chain dehydrogenase/reductase SDR  34.81 
 
 
278 aa  122  7e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  40.1 
 
 
281 aa  122  8e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
NC_011729  PCC7424_4855  short-chain dehydrogenase/reductase SDR  28.8 
 
 
274 aa  122  9e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_5665  short-chain dehydrogenase/reductase SDR  34.56 
 
 
275 aa  121  9.999999999999999e-27  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  35.56 
 
 
271 aa  121  9.999999999999999e-27  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0852  short-chain dehydrogenase/reductase SDR  33.56 
 
 
286 aa  121  9.999999999999999e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.068211 
 
 
-
 
NC_009523  RoseRS_2412  short-chain dehydrogenase/reductase SDR  34.96 
 
 
269 aa  120  1.9999999999999998e-26  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00185291  normal 
 
 
-
 
NC_009656  PSPA7_1796  short chain dehydrogenase  32.67 
 
 
590 aa  121  1.9999999999999998e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  0.425571  n/a   
 
 
-
 
NC_013757  Gobs_0783  short-chain dehydrogenase/reductase SDR  34.63 
 
 
298 aa  120  1.9999999999999998e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_4049  3-ketoacyl-(acyl-carrier-protein) reductase  35.57 
 
 
238 aa  120  3e-26  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4339  short-chain dehydrogenase/reductase SDR  35.02 
 
 
588 aa  120  3e-26  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  29.77 
 
 
264 aa  120  3e-26  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_009674  Bcer98_1494  3-ketoacyl-(acyl-carrier-protein) reductase  36.13 
 
 
239 aa  119  3.9999999999999996e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.000128809  n/a   
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  34.63 
 
 
273 aa  119  3.9999999999999996e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4878  short-chain dehydrogenase/reductase SDR  32.42 
 
 
302 aa  119  3.9999999999999996e-26  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00176242  normal  0.778008 
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  32.31 
 
 
295 aa  119  3.9999999999999996e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_008639  Cpha266_0762  short-chain dehydrogenase/reductase SDR  31.6 
 
 
280 aa  120  3.9999999999999996e-26  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3101  short-chain dehydrogenase/reductase SDR  36.02 
 
 
280 aa  120  3.9999999999999996e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.300242  normal  0.231356 
 
 
-
 
NC_013131  Caci_8731  short chain dehydrogenase  32.95 
 
 
590 aa  119  4.9999999999999996e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.199229  normal  0.347677 
 
 
-
 
NC_008463  PA14_21050  short chain dehydrogenase  32.8 
 
 
592 aa  119  4.9999999999999996e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2215  short chain dehydrogenase  30.16 
 
 
276 aa  119  7e-26  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0703  short-chain dehydrogenase/reductase SDR  32.58 
 
 
305 aa  119  7.999999999999999e-26  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_3599  short-chain dehydrogenase/reductase SDR  32.35 
 
 
296 aa  119  7.999999999999999e-26  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_0304  short-chain dehydrogenase/reductase SDR  30.69 
 
 
309 aa  118  9.999999999999999e-26  Psychrobacter sp. PRwf-1  Bacteria  normal  0.074209  normal  0.817715 
 
 
-
 
NC_008639  Cpha266_1156  short-chain dehydrogenase/reductase SDR  33.59 
 
 
280 aa  118  9.999999999999999e-26  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.434492  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>