More than 300 homologs were found in PanDaTox collection
for query gene Strop_2396 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_2396  short-chain dehydrogenase/reductase SDR  100 
 
 
321 aa  621  1e-177  Salinispora tropica CNB-440  Bacteria  normal  0.13478  normal 
 
 
-
 
NC_009953  Sare_2544  short-chain dehydrogenase/reductase SDR  82.47 
 
 
313 aa  398  9.999999999999999e-111  Salinispora arenicola CNS-205  Bacteria  normal  0.638785  decreased coverage  0.00000422955 
 
 
-
 
NC_013131  Caci_5627  short-chain dehydrogenase/reductase SDR  55.47 
 
 
282 aa  273  2.0000000000000002e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.193827 
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  51.82 
 
 
273 aa  253  5.000000000000001e-66  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3066  short-chain dehydrogenase/reductase SDR  50.37 
 
 
273 aa  242  7.999999999999999e-63  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.172953  normal 
 
 
-
 
NC_010725  Mpop_4692  short-chain dehydrogenase/reductase SDR  51.82 
 
 
274 aa  239  4e-62  Methylobacterium populi BJ001  Bacteria  normal  0.169711  normal  0.0760952 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  47.96 
 
 
281 aa  230  2e-59  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3686  short-chain dehydrogenase/reductase SDR  50.92 
 
 
273 aa  226  3e-58  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00031135 
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  46.13 
 
 
279 aa  226  4e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  49.64 
 
 
281 aa  226  6e-58  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
NC_010172  Mext_4179  short-chain dehydrogenase/reductase SDR  51.49 
 
 
274 aa  224  2e-57  Methylobacterium extorquens PA1  Bacteria  normal  0.719073  normal 
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  46.12 
 
 
279 aa  223  4e-57  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  46.9 
 
 
271 aa  223  4e-57  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4548  short-chain dehydrogenase/reductase SDR  50.36 
 
 
274 aa  222  8e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.239905  normal  0.858139 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  45.77 
 
 
278 aa  212  7e-54  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  44.44 
 
 
296 aa  211  2e-53  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  45.49 
 
 
286 aa  211  2e-53  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  44.07 
 
 
296 aa  210  3e-53  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  43.96 
 
 
295 aa  207  2e-52  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_007973  Rmet_3599  short-chain dehydrogenase/reductase SDR  42.76 
 
 
296 aa  206  3e-52  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  42.8 
 
 
315 aa  203  3e-51  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_007511  Bcep18194_B1144  Short-chain dehydrogenase/reductase SDR  42.38 
 
 
307 aa  203  4e-51  Burkholderia sp. 383  Bacteria  normal  0.151567  normal  0.117156 
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  43.18 
 
 
308 aa  202  6e-51  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  43.18 
 
 
308 aa  202  6e-51  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  43.18 
 
 
308 aa  202  6e-51  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  43.18 
 
 
308 aa  202  6e-51  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  43.18 
 
 
308 aa  202  6e-51  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  43.49 
 
 
311 aa  201  9e-51  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_008699  Noca_3699  short-chain dehydrogenase/reductase SDR  47.13 
 
 
280 aa  202  9e-51  Nocardioides sp. JS614  Bacteria  normal  0.0817481  n/a   
 
 
-
 
NC_009524  PsycPRwf_0304  short-chain dehydrogenase/reductase SDR  39.86 
 
 
309 aa  201  9.999999999999999e-51  Psychrobacter sp. PRwf-1  Bacteria  normal  0.074209  normal  0.817715 
 
 
-
 
NC_009656  PSPA7_3796  putative short-chain dehydrogenase  43.22 
 
 
295 aa  201  9.999999999999999e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  0.205058  n/a   
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  44.32 
 
 
295 aa  201  9.999999999999999e-51  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_010086  Bmul_4018  short-chain dehydrogenase/reductase SDR  42.01 
 
 
312 aa  201  1.9999999999999998e-50  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.169146  normal  0.55969 
 
 
-
 
NC_010515  Bcenmc03_5625  short-chain dehydrogenase/reductase SDR  42.01 
 
 
309 aa  200  3e-50  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.285502  normal 
 
 
-
 
NC_008543  Bcen2424_4675  short-chain dehydrogenase/reductase SDR  42.01 
 
 
309 aa  200  3e-50  Burkholderia cenocepacia HI2424  Bacteria  normal  0.396312  normal  0.215379 
 
 
-
 
NC_008061  Bcen_3693  short-chain dehydrogenase/reductase SDR  41.64 
 
 
309 aa  197  1.0000000000000001e-49  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1139  short-chain dehydrogenase/reductase SDR  48.13 
 
 
277 aa  197  2.0000000000000003e-49  Maricaulis maris MCS10  Bacteria  normal  0.248176  normal  0.05597 
 
 
-
 
NC_008391  Bamb_4069  short-chain dehydrogenase/reductase SDR  41.13 
 
 
312 aa  194  1e-48  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.596903 
 
 
-
 
NC_008740  Maqu_0158  short-chain dehydrogenase/reductase SDR  43.51 
 
 
271 aa  193  3e-48  Marinobacter aquaeolei VT8  Bacteria  normal  0.722445  n/a   
 
 
-
 
NC_007952  Bxe_B1790  short chain dehydrogenase  43.8 
 
 
307 aa  192  8e-48  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.00000125648 
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  44.24 
 
 
300 aa  189  5.999999999999999e-47  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_007650  BTH_II0404  short chain dehydrogenase/reductase family oxidoreductase  43.61 
 
 
302 aa  188  8e-47  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  44.24 
 
 
300 aa  188  9e-47  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_006349  BMAA0101  short chain dehydrogenase/reductase family oxidoreductase  43.61 
 
 
302 aa  187  1e-46  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0120  short chain dehydrogenase/reductase family oxidoreductase  43.61 
 
 
302 aa  188  1e-46  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  44.24 
 
 
300 aa  188  1e-46  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  44.24 
 
 
300 aa  188  1e-46  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_008835  BMA10229_1539  short chain dehydrogenase/reductase family oxidoreductase  43.61 
 
 
302 aa  188  1e-46  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1262  short chain dehydrogenase/reductase family oxidoreductase  43.61 
 
 
302 aa  187  1e-46  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4878  short-chain dehydrogenase/reductase SDR  42.7 
 
 
302 aa  187  2e-46  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00176242  normal  0.778008 
 
 
-
 
NC_009523  RoseRS_2412  short-chain dehydrogenase/reductase SDR  48.66 
 
 
269 aa  186  3e-46  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00185291  normal 
 
 
-
 
NC_009565  TBFG_13102  short-chain type dehydrogenase/reductase  42.22 
 
 
276 aa  186  3e-46  Mycobacterium tuberculosis F11  Bacteria  normal  0.432292  normal 
 
 
-
 
NC_007435  BURPS1710b_A1074  short chain dehydrogenase/reductase family oxidoreductase  43.23 
 
 
302 aa  186  4e-46  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2673  short chain dehydrogenase/reductase family oxidoreductase  43.23 
 
 
302 aa  186  4e-46  Burkholderia pseudomallei 1106a  Bacteria  normal  0.181377  n/a   
 
 
-
 
NC_009075  BURPS668_A2820  dehydrogenases with different specificities  43.23 
 
 
302 aa  186  4e-46  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  43.49 
 
 
300 aa  184  1.0000000000000001e-45  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  43.12 
 
 
308 aa  184  1.0000000000000001e-45  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_3569  short-chain dehydrogenase/reductase SDR  43.12 
 
 
308 aa  182  7e-45  Burkholderia ambifaria MC40-6  Bacteria  normal  0.683076  hitchhiker  0.00146118 
 
 
-
 
NC_014158  Tpau_1209  short-chain dehydrogenase/reductase SDR  43.4 
 
 
275 aa  182  8.000000000000001e-45  Tsukamurella paurometabola DSM 20162  Bacteria  hitchhiker  0.00962961  n/a   
 
 
-
 
NC_013441  Gbro_1880  short-chain dehydrogenase/reductase SDR  41.83 
 
 
276 aa  180  2.9999999999999997e-44  Gordonia bronchialis DSM 43247  Bacteria  normal  0.138576  n/a   
 
 
-
 
NC_009077  Mjls_3989  short-chain dehydrogenase/reductase SDR  42.64 
 
 
276 aa  179  5.999999999999999e-44  Mycobacterium sp. JLS  Bacteria  normal  0.171067  normal  0.181158 
 
 
-
 
NC_008146  Mmcs_3975  short-chain dehydrogenase/reductase SDR  42.64 
 
 
276 aa  179  5.999999999999999e-44  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4049  short-chain dehydrogenase/reductase SDR  42.64 
 
 
276 aa  179  5.999999999999999e-44  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2257  short-chain dehydrogenase/reductase SDR  43.23 
 
 
275 aa  178  1e-43  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.116431  n/a   
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  40 
 
 
276 aa  176  4e-43  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_008726  Mvan_4479  short-chain dehydrogenase/reductase SDR  40.23 
 
 
276 aa  171  1e-41  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0643496  normal  0.318534 
 
 
-
 
NC_013739  Cwoe_5665  short-chain dehydrogenase/reductase SDR  43.8 
 
 
275 aa  171  2e-41  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2216  short-chain dehydrogenase/reductase SDR  40.08 
 
 
276 aa  164  2.0000000000000002e-39  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.742045 
 
 
-
 
NC_009338  Mflv_4313  short chain dehydrogenase  38.02 
 
 
290 aa  147  2.0000000000000003e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2034  short chain dehydrogenase  37.36 
 
 
290 aa  146  5e-34  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.959562 
 
 
-
 
NC_013757  Gobs_2356  short-chain dehydrogenase/reductase SDR  40.61 
 
 
282 aa  145  6e-34  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0998128  n/a   
 
 
-
 
NC_009565  TBFG_13074  short chain dehydrogenase  38.81 
 
 
287 aa  143  4e-33  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.486367 
 
 
-
 
NC_008146  Mmcs_4117  short-chain dehydrogenase/reductase SDR  37.83 
 
 
274 aa  137  2e-31  Mycobacterium sp. MCS  Bacteria  normal  0.0106138  n/a   
 
 
-
 
NC_008705  Mkms_4192  short-chain dehydrogenase/reductase SDR  37.83 
 
 
274 aa  137  2e-31  Mycobacterium sp. KMS  Bacteria  normal  0.879856  normal 
 
 
-
 
NC_009077  Mjls_1791  short chain dehydrogenase  37.94 
 
 
285 aa  137  3.0000000000000003e-31  Mycobacterium sp. JLS  Bacteria  normal  0.0146977  normal 
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  34.55 
 
 
275 aa  136  4e-31  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_008146  Mmcs_1810  short chain dehydrogenase  37.55 
 
 
285 aa  135  6.0000000000000005e-31  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4348  short-chain dehydrogenase/reductase SDR  37.45 
 
 
274 aa  136  6.0000000000000005e-31  Mycobacterium sp. JLS  Bacteria  normal  normal  0.201544 
 
 
-
 
NC_008705  Mkms_1857  short chain dehydrogenase  37.55 
 
 
285 aa  135  6.0000000000000005e-31  Mycobacterium sp. KMS  Bacteria  normal  normal  0.160159 
 
 
-
 
NC_008699  Noca_2840  short chain dehydrogenase  36.81 
 
 
302 aa  135  8e-31  Nocardioides sp. JS614  Bacteria  normal  0.28747  n/a   
 
 
-
 
NC_011060  Ppha_1918  short-chain dehydrogenase/reductase SDR  36.36 
 
 
280 aa  129  5.0000000000000004e-29  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.000963224  n/a   
 
 
-
 
NC_013441  Gbro_1603  short-chain dehydrogenase/reductase SDR  36.03 
 
 
277 aa  129  6e-29  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2317  short-chain dehydrogenase/reductase SDR  37.45 
 
 
263 aa  128  1.0000000000000001e-28  Thermobispora bispora DSM 43833  Bacteria  normal  0.49068  normal  0.325129 
 
 
-
 
NC_009425  Ent638_4222  short-chain dehydrogenase/reductase SDR  39.01 
 
 
242 aa  127  3e-28  Enterobacter sp. 638  Bacteria  normal  0.186526  normal 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  29.77 
 
 
261 aa  127  4.0000000000000003e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  31.97 
 
 
267 aa  126  5e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_008009  Acid345_2393  short chain dehydrogenase  32.46 
 
 
344 aa  125  7e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.895738 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  32.2 
 
 
264 aa  124  2e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2306  short-chain dehydrogenase/reductase SDR  36.62 
 
 
286 aa  124  2e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.930868  n/a   
 
 
-
 
NC_013595  Sros_6830  oxidoreductase  36.5 
 
 
265 aa  124  2e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.356358 
 
 
-
 
NC_008726  Mvan_0852  short-chain dehydrogenase/reductase SDR  36.29 
 
 
286 aa  124  3e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.068211 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  31.82 
 
 
264 aa  122  7e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  31.82 
 
 
264 aa  122  7e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  31.82 
 
 
264 aa  122  7e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  31.82 
 
 
264 aa  122  8e-27  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  32.2 
 
 
264 aa  122  9e-27  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2639  short-chain dehydrogenase/reductase SDR  36.5 
 
 
238 aa  121  1.9999999999999998e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  0.37123  n/a   
 
 
-
 
NC_013757  Gobs_0783  short-chain dehydrogenase/reductase SDR  37.83 
 
 
298 aa  121  1.9999999999999998e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3168  short-chain dehydrogenase/reductase SDR  37.05 
 
 
269 aa  121  1.9999999999999998e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.685444  normal 
 
 
-
 
NC_009943  Dole_2823  short chain dehydrogenase  33.07 
 
 
292 aa  120  3e-26  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00207351  n/a   
 
 
-
 
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