More than 300 homologs were found in PanDaTox collection
for query gene Mmcs_4117 on replicon NC_008146
Organism: Mycobacterium sp. MCS



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009077  Mjls_4348  short-chain dehydrogenase/reductase SDR  99.64 
 
 
274 aa  540  1e-153  Mycobacterium sp. JLS  Bacteria  normal  normal  0.201544 
 
 
-
 
NC_008146  Mmcs_4117  short-chain dehydrogenase/reductase SDR  100 
 
 
274 aa  543  1e-153  Mycobacterium sp. MCS  Bacteria  normal  0.0106138  n/a   
 
 
-
 
NC_008705  Mkms_4192  short-chain dehydrogenase/reductase SDR  100 
 
 
274 aa  543  1e-153  Mycobacterium sp. KMS  Bacteria  normal  0.879856  normal 
 
 
-
 
NC_009338  Mflv_2070  short-chain dehydrogenase/reductase SDR  73.78 
 
 
275 aa  380  1e-104  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0241632 
 
 
-
 
NC_008726  Mvan_4644  short-chain dehydrogenase/reductase SDR  78.73 
 
 
279 aa  377  1e-103  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.931829  normal 
 
 
-
 
NC_013441  Gbro_1603  short-chain dehydrogenase/reductase SDR  73 
 
 
277 aa  353  2e-96  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2317  short-chain dehydrogenase/reductase SDR  53.38 
 
 
263 aa  237  2e-61  Thermobispora bispora DSM 43833  Bacteria  normal  0.49068  normal  0.325129 
 
 
-
 
NC_013595  Sros_6830  oxidoreductase  52.71 
 
 
265 aa  235  5.0000000000000005e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.356358 
 
 
-
 
NC_009338  Mflv_3370  short-chain dehydrogenase/reductase SDR  49.08 
 
 
285 aa  221  9.999999999999999e-57  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.976299 
 
 
-
 
NC_011060  Ppha_1918  short-chain dehydrogenase/reductase SDR  45.79 
 
 
280 aa  218  7.999999999999999e-56  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.000963224  n/a   
 
 
-
 
NC_008726  Mvan_3101  short-chain dehydrogenase/reductase SDR  49.82 
 
 
280 aa  216  2e-55  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.300242  normal  0.231356 
 
 
-
 
NC_013757  Gobs_0783  short-chain dehydrogenase/reductase SDR  48.93 
 
 
298 aa  212  5.999999999999999e-54  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1562  short-chain dehydrogenase/reductase SDR  48.87 
 
 
275 aa  206  3e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0498761  n/a   
 
 
-
 
NC_008639  Cpha266_1156  short-chain dehydrogenase/reductase SDR  47.84 
 
 
280 aa  199  5e-50  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.434492  n/a   
 
 
-
 
NC_011658  BCAH187_A2719  short chain dehydrogenase family protein  37.92 
 
 
273 aa  187  2e-46  Bacillus cereus AH187  Bacteria  normal  0.272681  n/a   
 
 
-
 
NC_003909  BCE_2681  short chain dehydrogenase family protein  38.29 
 
 
273 aa  185  6e-46  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00380586  n/a   
 
 
-
 
NC_009943  Dole_1249  short-chain dehydrogenase/reductase SDR  44.14 
 
 
273 aa  185  6e-46  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0626824  n/a   
 
 
-
 
NC_009674  Bcer98_1838  short-chain dehydrogenase/reductase SDR  41.85 
 
 
184 aa  152  7e-36  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0709005  n/a   
 
 
-
 
NC_009051  Memar_1129  short-chain dehydrogenase/reductase SDR  37.7 
 
 
278 aa  151  1e-35  Methanoculleus marisnigri JR1  Archaea  normal  0.561593  n/a   
 
 
-
 
NC_013595  Sros_0520  short-chain dehydrogenase/reductase SDR  34.91 
 
 
602 aa  144  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0852  short-chain dehydrogenase/reductase SDR  39.75 
 
 
286 aa  142  5e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.068211 
 
 
-
 
NC_007796  Mhun_2367  short-chain dehydrogenase/reductase SDR  37.97 
 
 
272 aa  139  3.9999999999999997e-32  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.264463 
 
 
-
 
NC_007796  Mhun_2368  short-chain dehydrogenase/reductase SDR  35.56 
 
 
274 aa  139  4.999999999999999e-32  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.448097 
 
 
-
 
NC_008009  Acid345_2397  short-chain dehydrogenase/reductase SDR  34.91 
 
 
284 aa  137  1e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0045  short-chain dehydrogenase/reductase SDR  35.61 
 
 
297 aa  131  1.0000000000000001e-29  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  33.72 
 
 
275 aa  129  4.0000000000000003e-29  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_013440  Hoch_5364  short-chain dehydrogenase/reductase SDR  40.1 
 
 
267 aa  129  5.0000000000000004e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  0.676071  normal 
 
 
-
 
NC_008148  Rxyl_0706  short-chain dehydrogenase/reductase SDR  38.59 
 
 
242 aa  129  6e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  hitchhiker  0.00246779  n/a   
 
 
-
 
NC_013131  Caci_8731  short chain dehydrogenase  34.34 
 
 
590 aa  129  6e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.199229  normal  0.347677 
 
 
-
 
NC_011894  Mnod_5663  short-chain dehydrogenase/reductase SDR  40.62 
 
 
274 aa  128  9.000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.686827  n/a   
 
 
-
 
NC_013159  Svir_33830  short chain dehydrogenase  36.4 
 
 
568 aa  127  1.0000000000000001e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  34.26 
 
 
295 aa  127  1.0000000000000001e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_013093  Amir_1608  short-chain dehydrogenase/reductase SDR  38.98 
 
 
270 aa  127  2.0000000000000002e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0626864  n/a   
 
 
-
 
NC_014158  Tpau_2974  short-chain dehydrogenase/reductase SDR  34.49 
 
 
309 aa  127  2.0000000000000002e-28  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4313  short chain dehydrogenase  35.66 
 
 
290 aa  126  4.0000000000000003e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3796  putative short-chain dehydrogenase  34.14 
 
 
295 aa  126  4.0000000000000003e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  0.205058  n/a   
 
 
-
 
NC_008726  Mvan_2034  short chain dehydrogenase  35.88 
 
 
290 aa  125  8.000000000000001e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.959562 
 
 
-
 
NC_007005  Psyr_0194  Short-chain dehydrogenase/reductase SDR  37.82 
 
 
244 aa  124  1e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2115  hypothetical protein  41.54 
 
 
292 aa  124  1e-27  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4339  short-chain dehydrogenase/reductase SDR  35.34 
 
 
588 aa  123  4e-27  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  37.96 
 
 
300 aa  122  4e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_008254  Meso_2224  short-chain dehydrogenase/reductase SDR  40.82 
 
 
251 aa  122  5e-27  Chelativorans sp. BNC1  Bacteria  normal  0.475602  n/a   
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  37.96 
 
 
300 aa  122  6e-27  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13074  short chain dehydrogenase  34.4 
 
 
287 aa  122  7e-27  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.486367 
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  37.96 
 
 
300 aa  122  7e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  37.96 
 
 
300 aa  122  7e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_012791  Vapar_0808  short-chain dehydrogenase/reductase SDR  40 
 
 
252 aa  122  7e-27  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0522  short-chain dehydrogenase/reductase SDR  35.02 
 
 
278 aa  122  8e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3851  Short-chain dehydrogenase/reductase SDR:glucose/ribitol dehydrogenase  37.72 
 
 
277 aa  121  9e-27  Ralstonia eutropha JMP134  Bacteria  normal  0.277606  n/a   
 
 
-
 
NC_007492  Pfl01_4194  short chain dehydrogenase  39.38 
 
 
253 aa  121  9.999999999999999e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.896625 
 
 
-
 
NC_007794  Saro_0793  short-chain dehydrogenase/reductase SDR  37.88 
 
 
310 aa  120  1.9999999999999998e-26  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.190304  n/a   
 
 
-
 
NC_013525  Tter_0268  short-chain dehydrogenase/reductase SDR  37.17 
 
 
250 aa  120  3e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013501  Rmar_2639  short-chain dehydrogenase/reductase SDR  37.38 
 
 
238 aa  120  3e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  0.37123  n/a   
 
 
-
 
NC_011989  Avi_3319  d-beta-hydroxybutyrate dehydrogenase  34.74 
 
 
256 aa  120  3e-26  Agrobacterium vitis S4  Bacteria  normal  0.0697406  n/a   
 
 
-
 
NC_011004  Rpal_4687  3-hydroxybutyrate dehydrogenase  30.92 
 
 
262 aa  119  3.9999999999999996e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1408  3-hydroxybutyrate dehydrogenase  35.9 
 
 
281 aa  119  3.9999999999999996e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3322  short chain dehydrogenase  35.07 
 
 
588 aa  119  4.9999999999999996e-26  Mycobacterium sp. JLS  Bacteria  normal  normal  0.178301 
 
 
-
 
NC_008146  Mmcs_3311  short chain dehydrogenase  35.07 
 
 
588 aa  119  4.9999999999999996e-26  Mycobacterium sp. MCS  Bacteria  normal  0.768628  n/a   
 
 
-
 
NC_009049  Rsph17029_1436  3-hydroxybutyrate dehydrogenase  40 
 
 
257 aa  119  4.9999999999999996e-26  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  hitchhiker  0.00798692 
 
 
-
 
NC_008705  Mkms_3373  short chain dehydrogenase  35.07 
 
 
588 aa  119  4.9999999999999996e-26  Mycobacterium sp. KMS  Bacteria  normal  0.855673  normal  0.12205 
 
 
-
 
NC_013730  Slin_3152  short-chain dehydrogenase/reductase SDR  38.14 
 
 
250 aa  119  6e-26  Spirosoma linguale DSM 74  Bacteria  normal  0.182399  normal 
 
 
-
 
NC_007958  RPD_1388  3-hydroxybutyrate dehydrogenase  32.76 
 
 
262 aa  119  7e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_0762  short-chain dehydrogenase/reductase SDR  37.17 
 
 
280 aa  119  7e-26  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1791  short chain dehydrogenase  33.07 
 
 
285 aa  118  7.999999999999999e-26  Mycobacterium sp. JLS  Bacteria  normal  0.0146977  normal 
 
 
-
 
NC_007493  RSP_2857  D-beta-hydroxybutyrate dehydrogenase  40.51 
 
 
265 aa  118  9.999999999999999e-26  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.520091  n/a   
 
 
-
 
NC_009380  Strop_2396  short-chain dehydrogenase/reductase SDR  37.83 
 
 
321 aa  118  9.999999999999999e-26  Salinispora tropica CNB-440  Bacteria  normal  0.13478  normal 
 
 
-
 
NC_012848  Rleg_4853  short-chain dehydrogenase/reductase SDR  37.84 
 
 
248 aa  118  9.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.154391  normal  0.241568 
 
 
-
 
NC_009719  Plav_0548  short-chain dehydrogenase/reductase SDR  42.64 
 
 
261 aa  118  9.999999999999999e-26  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  34.78 
 
 
296 aa  117  9.999999999999999e-26  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  39.27 
 
 
276 aa  118  9.999999999999999e-26  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_008825  Mpe_A1784  hypothetical protein  41.01 
 
 
305 aa  117  1.9999999999999998e-25  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.59437 
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  34.69 
 
 
300 aa  117  1.9999999999999998e-25  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_007908  Rfer_2069  3-hydroxybutyrate dehydrogenase  36.17 
 
 
256 aa  117  1.9999999999999998e-25  Rhodoferax ferrireducens T118  Bacteria  normal  0.343315  n/a   
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  34.78 
 
 
296 aa  117  1.9999999999999998e-25  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_008146  Mmcs_1810  short chain dehydrogenase  32.68 
 
 
285 aa  117  1.9999999999999998e-25  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3975  short-chain dehydrogenase/reductase SDR  35.32 
 
 
276 aa  117  1.9999999999999998e-25  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3989  short-chain dehydrogenase/reductase SDR  35.32 
 
 
276 aa  117  1.9999999999999998e-25  Mycobacterium sp. JLS  Bacteria  normal  0.171067  normal  0.181158 
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  35.94 
 
 
273 aa  117  1.9999999999999998e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1857  short chain dehydrogenase  32.68 
 
 
285 aa  117  1.9999999999999998e-25  Mycobacterium sp. KMS  Bacteria  normal  normal  0.160159 
 
 
-
 
NC_008705  Mkms_4049  short-chain dehydrogenase/reductase SDR  35.32 
 
 
276 aa  117  1.9999999999999998e-25  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2194  short-chain dehydrogenase/reductase SDR  28.47 
 
 
280 aa  116  3e-25  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0155651  n/a   
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  32.94 
 
 
258 aa  116  3e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2091  short-chain dehydrogenase/reductase SDR  39.27 
 
 
260 aa  116  3e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0967231  n/a   
 
 
-
 
NC_008148  Rxyl_2275  short-chain dehydrogenase/reductase SDR  38.1 
 
 
254 aa  116  3e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3460  short-chain dehydrogenase/reductase SDR  38.5 
 
 
245 aa  116  3e-25  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2823  short chain dehydrogenase  29.08 
 
 
292 aa  117  3e-25  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00207351  n/a   
 
 
-
 
NC_009565  TBFG_13102  short-chain type dehydrogenase/reductase  33.71 
 
 
276 aa  116  3.9999999999999997e-25  Mycobacterium tuberculosis F11  Bacteria  normal  0.432292  normal 
 
 
-
 
NC_007492  Pfl01_2470  Short-chain dehydrogenase/reductase SDR  33.48 
 
 
244 aa  116  3.9999999999999997e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_2238  short-chain dehydrogenase/reductase SDR  38.42 
 
 
317 aa  116  3.9999999999999997e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  31.69 
 
 
295 aa  116  3.9999999999999997e-25  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  34.42 
 
 
308 aa  116  3.9999999999999997e-25  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1954  short chain dehydrogenase/reductase family oxidoreductase  37.31 
 
 
250 aa  116  5e-25  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  37.5 
 
 
248 aa  116  5e-25  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_008146  Mmcs_1552  short-chain dehydrogenase/reductase SDR  43.41 
 
 
246 aa  115  5e-25  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1575  short-chain dehydrogenase/reductase SDR  43.41 
 
 
246 aa  115  5e-25  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3009  3-hydroxybutyrate dehydrogenase  36.73 
 
 
261 aa  115  6e-25  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0803108 
 
 
-
 
NC_013743  Htur_0514  short-chain dehydrogenase/reductase SDR  38.97 
 
 
252 aa  115  6e-25  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009801  EcE24377A_1665  3-hydroxybutyrate dehydrogenase  31.8 
 
 
256 aa  115  6e-25  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  35.56 
 
 
278 aa  115  6e-25  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_010581  Bind_2696  3-hydroxybutyrate dehydrogenase  34.7 
 
 
260 aa  115  6e-25  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.262261  normal  0.672061 
 
 
-
 
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