More than 300 homologs were found in PanDaTox collection
for query gene Mrad2831_5451 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  100 
 
 
281 aa  556  1e-158  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
NC_010725  Mpop_4692  short-chain dehydrogenase/reductase SDR  62.82 
 
 
274 aa  306  2.0000000000000002e-82  Methylobacterium populi BJ001  Bacteria  normal  0.169711  normal  0.0760952 
 
 
-
 
NC_010172  Mext_4179  short-chain dehydrogenase/reductase SDR  62.59 
 
 
274 aa  299  4e-80  Methylobacterium extorquens PA1  Bacteria  normal  0.719073  normal 
 
 
-
 
NC_011757  Mchl_4548  short-chain dehydrogenase/reductase SDR  62.23 
 
 
274 aa  299  4e-80  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.239905  normal  0.858139 
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  58.57 
 
 
273 aa  289  4e-77  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3686  short-chain dehydrogenase/reductase SDR  61.43 
 
 
273 aa  279  3e-74  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00031135 
 
 
-
 
NC_009767  Rcas_3066  short-chain dehydrogenase/reductase SDR  51.43 
 
 
273 aa  254  1.0000000000000001e-66  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.172953  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  48.18 
 
 
281 aa  253  2.0000000000000002e-66  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  50.55 
 
 
271 aa  252  4.0000000000000004e-66  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  50.53 
 
 
286 aa  237  1e-61  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  49.08 
 
 
279 aa  234  1.0000000000000001e-60  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_009380  Strop_2396  short-chain dehydrogenase/reductase SDR  49.64 
 
 
321 aa  223  2e-57  Salinispora tropica CNB-440  Bacteria  normal  0.13478  normal 
 
 
-
 
NC_008347  Mmar10_1139  short-chain dehydrogenase/reductase SDR  50.18 
 
 
277 aa  215  8e-55  Maricaulis maris MCS10  Bacteria  normal  0.248176  normal  0.05597 
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  42.96 
 
 
279 aa  211  2e-53  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_013131  Caci_5627  short-chain dehydrogenase/reductase SDR  45.74 
 
 
282 aa  208  7e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.193827 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  44.53 
 
 
278 aa  204  1e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_009953  Sare_2544  short-chain dehydrogenase/reductase SDR  49.82 
 
 
313 aa  203  3e-51  Salinispora arenicola CNS-205  Bacteria  normal  0.638785  decreased coverage  0.00000422955 
 
 
-
 
NC_009523  RoseRS_2412  short-chain dehydrogenase/reductase SDR  48.72 
 
 
269 aa  192  4e-48  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00185291  normal 
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  41.79 
 
 
295 aa  190  2e-47  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_013739  Cwoe_5665  short-chain dehydrogenase/reductase SDR  42.65 
 
 
275 aa  186  5e-46  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  42.7 
 
 
300 aa  185  7e-46  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  42.7 
 
 
300 aa  184  1.0000000000000001e-45  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  42.7 
 
 
300 aa  184  1.0000000000000001e-45  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  39.78 
 
 
295 aa  183  2.0000000000000003e-45  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_008740  Maqu_0158  short-chain dehydrogenase/reductase SDR  40.43 
 
 
271 aa  182  4.0000000000000006e-45  Marinobacter aquaeolei VT8  Bacteria  normal  0.722445  n/a   
 
 
-
 
NC_007511  Bcep18194_B1144  Short-chain dehydrogenase/reductase SDR  39.21 
 
 
307 aa  182  5.0000000000000004e-45  Burkholderia sp. 383  Bacteria  normal  0.151567  normal  0.117156 
 
 
-
 
NC_010515  Bcenmc03_5625  short-chain dehydrogenase/reductase SDR  38.85 
 
 
309 aa  181  1e-44  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.285502  normal 
 
 
-
 
NC_008543  Bcen2424_4675  short-chain dehydrogenase/reductase SDR  38.85 
 
 
309 aa  181  1e-44  Burkholderia cenocepacia HI2424  Bacteria  normal  0.396312  normal  0.215379 
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  41.97 
 
 
300 aa  181  2e-44  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3796  putative short-chain dehydrogenase  39.63 
 
 
295 aa  180  2e-44  Pseudomonas aeruginosa PA7  Bacteria  normal  0.205058  n/a   
 
 
-
 
NC_010552  BamMC406_3569  short-chain dehydrogenase/reductase SDR  40.88 
 
 
308 aa  179  2.9999999999999997e-44  Burkholderia ambifaria MC40-6  Bacteria  normal  0.683076  hitchhiker  0.00146118 
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  40.88 
 
 
308 aa  179  2.9999999999999997e-44  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  40.88 
 
 
300 aa  180  2.9999999999999997e-44  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_008391  Bamb_4069  short-chain dehydrogenase/reductase SDR  37.55 
 
 
312 aa  179  4.999999999999999e-44  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.596903 
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  37.96 
 
 
311 aa  179  5.999999999999999e-44  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_008061  Bcen_3693  short-chain dehydrogenase/reductase SDR  38.49 
 
 
309 aa  178  7e-44  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_0304  short-chain dehydrogenase/reductase SDR  37.68 
 
 
309 aa  178  8e-44  Psychrobacter sp. PRwf-1  Bacteria  normal  0.074209  normal  0.817715 
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  36.76 
 
 
296 aa  176  4e-43  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3699  short-chain dehydrogenase/reductase SDR  40.71 
 
 
280 aa  176  4e-43  Nocardioides sp. JS614  Bacteria  normal  0.0817481  n/a   
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  36.76 
 
 
296 aa  175  6e-43  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_010086  Bmul_4018  short-chain dehydrogenase/reductase SDR  36.5 
 
 
312 aa  175  7e-43  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.169146  normal  0.55969 
 
 
-
 
NC_009079  BMA10247_A0120  short chain dehydrogenase/reductase family oxidoreductase  39.86 
 
 
302 aa  175  8e-43  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1539  short chain dehydrogenase/reductase family oxidoreductase  39.86 
 
 
302 aa  175  8e-43  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0101  short chain dehydrogenase/reductase family oxidoreductase  39.86 
 
 
302 aa  174  9.999999999999999e-43  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1074  short chain dehydrogenase/reductase family oxidoreductase  39.86 
 
 
302 aa  174  9.999999999999999e-43  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  36.86 
 
 
308 aa  174  9.999999999999999e-43  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2820  dehydrogenases with different specificities  39.86 
 
 
302 aa  174  9.999999999999999e-43  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  36.86 
 
 
308 aa  174  9.999999999999999e-43  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_3599  short-chain dehydrogenase/reductase SDR  38.97 
 
 
296 aa  174  9.999999999999999e-43  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  36.86 
 
 
308 aa  174  9.999999999999999e-43  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  36.86 
 
 
308 aa  174  9.999999999999999e-43  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2673  short chain dehydrogenase/reductase family oxidoreductase  39.86 
 
 
302 aa  174  9.999999999999999e-43  Burkholderia pseudomallei 1106a  Bacteria  normal  0.181377  n/a   
 
 
-
 
NC_008784  BMASAVP1_1262  short chain dehydrogenase/reductase family oxidoreductase  39.86 
 
 
302 aa  174  9.999999999999999e-43  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  36.86 
 
 
308 aa  174  9.999999999999999e-43  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  36.86 
 
 
315 aa  172  6.999999999999999e-42  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_007650  BTH_II0404  short chain dehydrogenase/reductase family oxidoreductase  39.13 
 
 
302 aa  171  1e-41  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  39.49 
 
 
276 aa  171  2e-41  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_008726  Mvan_4479  short-chain dehydrogenase/reductase SDR  39.07 
 
 
276 aa  170  3e-41  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0643496  normal  0.318534 
 
 
-
 
NC_014158  Tpau_1209  short-chain dehydrogenase/reductase SDR  42.54 
 
 
275 aa  167  1e-40  Tsukamurella paurometabola DSM 20162  Bacteria  hitchhiker  0.00962961  n/a   
 
 
-
 
NC_009565  TBFG_13102  short-chain type dehydrogenase/reductase  40.29 
 
 
276 aa  164  2.0000000000000002e-39  Mycobacterium tuberculosis F11  Bacteria  normal  0.432292  normal 
 
 
-
 
NC_009338  Mflv_2216  short-chain dehydrogenase/reductase SDR  38.35 
 
 
276 aa  161  9e-39  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.742045 
 
 
-
 
NC_009077  Mjls_3989  short-chain dehydrogenase/reductase SDR  37.63 
 
 
276 aa  160  2e-38  Mycobacterium sp. JLS  Bacteria  normal  0.171067  normal  0.181158 
 
 
-
 
NC_007952  Bxe_B1790  short chain dehydrogenase  37.05 
 
 
307 aa  160  2e-38  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.00000125648 
 
 
-
 
NC_008146  Mmcs_3975  short-chain dehydrogenase/reductase SDR  37.63 
 
 
276 aa  160  2e-38  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4049  short-chain dehydrogenase/reductase SDR  37.63 
 
 
276 aa  160  2e-38  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4878  short-chain dehydrogenase/reductase SDR  36.33 
 
 
302 aa  158  8e-38  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00176242  normal  0.778008 
 
 
-
 
NC_013757  Gobs_2356  short-chain dehydrogenase/reductase SDR  41.51 
 
 
282 aa  158  9e-38  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0998128  n/a   
 
 
-
 
NC_013441  Gbro_1880  short-chain dehydrogenase/reductase SDR  37.18 
 
 
276 aa  157  2e-37  Gordonia bronchialis DSM 43247  Bacteria  normal  0.138576  n/a   
 
 
-
 
NC_014158  Tpau_2257  short-chain dehydrogenase/reductase SDR  41.35 
 
 
275 aa  155  6e-37  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.116431  n/a   
 
 
-
 
NC_009664  Krad_2525  short-chain dehydrogenase/reductase SDR  33.33 
 
 
276 aa  132  5e-30  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5364  short-chain dehydrogenase/reductase SDR  33.7 
 
 
267 aa  130  3e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  0.676071  normal 
 
 
-
 
NC_010725  Mpop_1226  short-chain dehydrogenase/reductase SDR  40 
 
 
247 aa  129  4.0000000000000003e-29  Methylobacterium populi BJ001  Bacteria  normal  0.340445  normal  0.365193 
 
 
-
 
NC_009338  Mflv_4313  short chain dehydrogenase  39.02 
 
 
290 aa  129  4.0000000000000003e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1244  short chain dehydrogenase  38.22 
 
 
270 aa  129  6e-29  Pseudomonas mendocina ymp  Bacteria  normal  0.542872  normal  0.404553 
 
 
-
 
NC_007760  Adeh_2306  short-chain dehydrogenase/reductase SDR  37.96 
 
 
286 aa  129  8.000000000000001e-29  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.930868  n/a   
 
 
-
 
NC_011369  Rleg2_0558  short chain dehydrogenase  30.77 
 
 
272 aa  128  1.0000000000000001e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.449424 
 
 
-
 
NC_013510  Tcur_1562  short-chain dehydrogenase/reductase SDR  35.42 
 
 
275 aa  127  1.0000000000000001e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0498761  n/a   
 
 
-
 
NC_013757  Gobs_0783  short-chain dehydrogenase/reductase SDR  37.26 
 
 
298 aa  127  2.0000000000000002e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  31 
 
 
236 aa  127  2.0000000000000002e-28  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_010172  Mext_1321  short-chain dehydrogenase/reductase SDR  32.96 
 
 
271 aa  127  2.0000000000000002e-28  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.318083 
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  38.72 
 
 
257 aa  126  3e-28  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_011757  Mchl_4114  short-chain dehydrogenase/reductase SDR  31.14 
 
 
273 aa  126  3e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.953941  normal 
 
 
-
 
NC_004578  PSPTO_1861  oxidoreductase, short chain dehydrogenase/reductase family  32.72 
 
 
270 aa  126  4.0000000000000003e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0952097  n/a   
 
 
-
 
NC_011891  A2cp1_1643  short-chain dehydrogenase/reductase SDR  41.74 
 
 
286 aa  126  4.0000000000000003e-28  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1565  short-chain dehydrogenase/reductase SDR  42.52 
 
 
286 aa  126  5e-28  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6615  short chain dehydrogenase  31.72 
 
 
271 aa  125  9e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.522985  normal  0.0823373 
 
 
-
 
NC_011729  PCC7424_4855  short-chain dehydrogenase/reductase SDR  38.07 
 
 
274 aa  125  9e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008726  Mvan_2034  short chain dehydrogenase  33.45 
 
 
290 aa  125  9e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.959562 
 
 
-
 
NC_009051  Memar_1129  short-chain dehydrogenase/reductase SDR  32.43 
 
 
278 aa  124  1e-27  Methanoculleus marisnigri JR1  Archaea  normal  0.561593  n/a   
 
 
-
 
NC_010501  PputW619_3021  short chain dehydrogenase  35.09 
 
 
268 aa  124  2e-27  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  31.23 
 
 
261 aa  124  2e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2823  short chain dehydrogenase  32.71 
 
 
292 aa  124  2e-27  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00207351  n/a   
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  33.67 
 
 
264 aa  123  3e-27  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_009425  Ent638_4222  short-chain dehydrogenase/reductase SDR  39.67 
 
 
242 aa  123  3e-27  Enterobacter sp. 638  Bacteria  normal  0.186526  normal 
 
 
-
 
NC_009565  TBFG_12242  short chain dehydrogenase  34.11 
 
 
592 aa  123  3e-27  Mycobacterium tuberculosis F11  Bacteria  normal  0.0208017  normal  0.29752 
 
 
-
 
NC_010338  Caul_4322  short chain dehydrogenase  36.86 
 
 
269 aa  122  5e-27  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  32.25 
 
 
275 aa  122  7e-27  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_009621  Smed_5892  short-chain dehydrogenase/reductase SDR  36.13 
 
 
240 aa  122  9.999999999999999e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.197583  normal  0.684579 
 
 
-
 
NC_013595  Sros_6830  oxidoreductase  39.23 
 
 
265 aa  121  9.999999999999999e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.356358 
 
 
-
 
NC_013169  Ksed_03130  short-chain dehydrogenase of unknown substrate specificity  35.07 
 
 
275 aa  121  9.999999999999999e-27  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
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